Effector profile
PlantPEAD ID: PlantPEAD39866 | Uniprot ID: A0A2W5GMY1 | Source: Orthologous |
Localization: Apoplastic(Pre) | Pathogen taxonomy ID: 1176649 | Pathogen type: Bacteria |
Species: Agrobacterium fabrum | Strain: S2_009_000_R2_73 | Other name: Agrobacterium tumefaciens |
Gene name: | NCBI Gene ID: QFOL01000358 | |
Entry name: A0A2W5GMY1_9HYPH | Protein name: Lytic murein transglycosylase | |
DOI: |
Gene/Protein information
Gene sequence:
ATGCGAAATCAATTCGCCCCGAAGGCACTGGCTGCACTTCTTTCCGTTTTTTCAGCAACGACAGCTTTGGCGCAGTCGGCGCCGACAGGAGCAGCGGCAGCGCGATATGACGCCGACTTCAACGCCTGGCTGAAAAAGGAAATCTGGCCGGAAGCCCGCAAGGCCGGCATATCGCAGAAAACACTTGAGGCCACGCTCAGCGGTCTTTCCATCAGCTGGAACCTGCCCGATCTCATCATTCCCGGCCAGAAGCCACCGAAGGAACAGAGCCAGAGTCAGGCTGAATTTTCCTCGCCGGGCGCCTATTTCTCCGAAAAGCGGCTGCAGGGATTGGCCGGCACCGGCCGCTCGCTTGCCGCCACCCATGCGGCGACGCTGCGCAGGATCGAGGCGAAATACGGTGTGCCCGGTGATATCGTCGTTGCGATATGGGGCCGCGAATCCGGTTTCGGCCGGGCAAAACTGCCGCATTCCGTGGTCGATGTGCTGGCCACGAAAGCCTATATGTCGACCCGCAAGGAGATGTTCCGCGCCGAGCTGATCGATGCGCTGAAGATCGTCGAAAGCGGCGATATCGCTGCATCGCGCATGATGGGCTCCTGGGCCGGCGCGCTCGGCCAGCCGCAATTCATGCCGTCGAGCTATCTCAAATATGCCGTGGATTTCGACGGCGACGGCCATCGCGATATCTGGAACTCCGTACCGGATGCGCTGGCATCCATAGCAAACTATCTTTCCCAGCGCGGCTGGCAGAGAAATCGCGACTGGGGTTTCGAAGTCTCGATCCCCGCCAATGTCTCCTGCGCGCAGGAAGGCCCTGATCTTGCCCGGCCGGTGGCCGACTGGGCGAAGATGGGCATTACCCGCATTTCCGGAAAAGCCTTTCCGGCCAACGACCTATCAGCCGATGGCATGATGCTGGTGCCGGCCGGGCGGCACGGGCCGGAATTCGTGGTTACACCGAATTTTTACGTCATCAAGGAATATAACAATTCCGATCTCTATGCGCTGTTCATCGGCAATCTCGCCGACCGCATCACCCATGGGGCGGGCCCGTTCAAGGGCGAATGGGGCAATGTCGGGTCGATGCTGCGCTCGGATGTTCTCGCCATGCAGAAGGCGCTGGTGGCCAAGGGTTACGATGTCGGCAAGGCAGATGGACTGGCCGGTTTCAAGACGCGCCGCTCACTCGGCGACTGGCAGGCCAAGAACAGGCTTTCACCGACGTGTTTTCCAGATGCAAGCCTGAAGGCTAAGCTGAAATAG
Protein sequence:
MRNQFAPKALAALLSVFSATTALAQSAPTGAAAARYDADFNAWLKKEIWPEARKAGISQKTLEATLSGLSISWNLPDLIIPGQKPPKEQSQSQAEFSSPGAYFSEKRLQGLAGTGRSLAATHAATLRRIEAKYGVPGDIVVAIWGRESGFGRAKLPHSVVDVLATKAYMSTRKEMFRAELIDALKIVESGDIAASRMMGSWAGALGQPQFMPSSYLKYAVDFDGDGHRDIWNSVPDALASIANYLSQRGWQRNRDWGFEVSIPANVSCAQEGPDLARPVADWAKMGITRISGKAFPANDLSADGMMLVPAGRHGPEFVVTPNFYVIKEYNNSDLYALFIGNLADRITHGAGPFKGEWGNVGSMLRSDVLAMQKALVAKGYDVGKADGLAGFKTRRSLGDWQAKNRLSPTCFPDASLKAKLK
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Main properties of effector
Molecular weight | Sequence length | Theoretical pI | GRAVY | Instability index |
---|---|---|---|---|
43752.8 | 421 | 9.41 | -0.215 | 35.72 |
Plant infestation information
Experimental plant: | |
Susceptible plant: | Disease name: |
Host classification: | NCBI Species: |
Pathogen-plant protein interaction
Uniprot ID | Protein name | Gene name | Species | Protein sequence |
---|
No Record found.
External Links
Interpro: IPR023346,IPR043426,IPR011970,IPR002477,IPR036365,IPR036366,IPR031304
Pfam: PF01471,PF13406
SMART:
KEGG:
PRINTS: