Effector profile
PlantPEAD ID: PlantPEAD39922 | Uniprot ID: A0A3D8SSZ3 | Source: Orthologous |
Localization: Apoplastic(Pre) | Pathogen taxonomy ID: 1849047 | Pathogen type: Fungi |
Species: Coleophoma cylindrospora | Strain: BP6252 | Other name: |
Gene name: | NCBI Gene ID: PDLM01000001 | |
Entry name: A0A3D8SSZ3_9HELO | Protein name: chitinase | |
DOI: |
Gene/Protein information
Gene sequence:
ATGGCGAAACCTAGATATATCATGTACTTGACAGGACAACATGATGTAGTGCCAGAGAAACCGCTAGTCTCGGGGATAACACATGTAGCGCTGGCTTTCATGCGATCCTCAACATTCAATGACCCAGCACCGACGTCCTGGCCACTCTTTACTACTGTGGATAAAGTCAGAACTCAGTTCAGCAATGGTACTGCCATCATGGTTGCCATTGGTGGCTGGGGAGACACCGAAGGTTTCTCCAAAGCTGCCGCAACTGATAGCAGTAGGCAACTCTTCGCGCAAAATGTAAAGGCTATGGTCGCATCCTCAGGTGCTGATGGTGTAGACATCGATTGGGAATATCCAGGAGGGAATGGAGAGGACTACAAGCAGATTCCCAACTCTGAAAAGGCGTGGGAGATCGACGCCTATCCCAAACTGCTGTCCGAAATCCGAAAGGCACTCGGTCCATCCAAACTCATGTCTGCAGCCGTTCCCGGCCTACCTCGAGACATGCTCGCGTTTACCAAGGCTACTATTCCACAGATTAGCGAGTCGTTAGACTTCTACAACATCATGACCTACGATCTCTTTAACCGACGGGACTCTATCACCAAACACCACACAGGTATACAGGCAAGTCTCGAAGCAATCCATGCATATCTAGAGAACGGTGTGGCCCCCGATAAGGCAAACCTCGGGTTTGCGTTCTATGTGAAATGGTACAAGACTGCGCCCGACGGCGGGTGCGACAAGAACCCAATTGGGTGCAAGACAACTCTGATGGAAGACCCAGAGACAGGTGGTGATCTTGGCCAAGCAGGGGCATTCTCATGGCATGATACAGTTCCCGCCGAGCTGGCGGTTTCTTTCGACAAGGCGTTGACTTATGGTTCCTATGACGAGCAAGGGGGTGGAAACTACTTTTGGGATAAAGACGAGGATCTCTTTTGGAGCTGGGATACTGAAGACGCCATCAGGAAGAAGTTCTCACCGATCATGGAAGAGAAGGGGTTAGGTGGTGCGTTTGCTTGGGGCTTGGGGGAGGATGCATTAGAATTTAGGCACTTGAAGACGCTGTCGGCGGCGATGGATGCCTTTGAGCTGAAGTCCGCTCAGTTGGTTAAAGACGAGTTATGA
Protein sequence:
MAKPRYIMYLTGQHDVVPEKPLVSGITHVALAFMRSSTFNDPAPTSWPLFTTVDKVRTQFSNGTAIMVAIGGWGDTEGFSKAAATDSSRQLFAQNVKAMVASSGADGVDIDWEYPGGNGEDYKQIPNSEKAWEIDAYPKLLSEIRKALGPSKLMSAAVPGLPRDMLAFTKATIPQISESLDFYNIMTYDLFNRRDSITKHHTGIQASLEAIHAYLENGVAPDKANLGFAFYVKWYKTAPDGGCDKNPIGCKTTLMEDPETGGDLGQAGAFSWHDTVPAELAVSFDKALTYGSYDEQGGGNYFWDKDEDLFWSWDTEDAIRKKFSPIMEEKGLGGAFAWGLGEDALEFRHLKTLSAAMDAFELKSAQLVKDEL
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Main properties of effector
Molecular weight | Sequence length | Theoretical pI | GRAVY | Instability index |
---|---|---|---|---|
41384.5 | 372 | 4.85 | -0.325 | 32.58 |
Plant infestation information
Experimental plant: | |
Susceptible plant: | Disease name: |
Host classification: | NCBI Species: |
Pathogen-plant protein interaction
Uniprot ID | Protein name | Gene name | Species | Protein sequence |
---|
No Record found.
External Links
Interpro: IPR011583,IPR001223,IPR017853
Pfam: PF00704
SMART: SM00636
KEGG:
PRINTS: