Effector profile
PlantPEAD ID: PlantPEAD40067 Uniprot ID: M1SWC2 Source: Orthologous
Localization: Cytoplasmic(Pre) Pathogen taxonomy ID: 346 Pathogen type: Bacteria
Species: Xanthomonas citri Strain: pv. citri strain JK2-10 Other name:
Gene name: XopC1 NCBI Gene ID: JX566666
Entry name: M1SWC2_XANCI Protein name: XopC1
DOI:
Gene/Protein information
Gene sequence:
ATGAAACCAAGTAGTGCAAGCAAGTCTCATTATACTGGCCAATTTCCCCAGGGGGATTTGCAGCCAAAAACTCCAATTCCAGTGGGACGCAATAGCGAAATTCCAAAGGATGCGGCATTAAGCGCCCAACTAAAGGGGCTCCGCCCTCTTGATCGTAAGCCATCTAAAATGCCAACTTCTAGCAGTGATCTTCAGGCGGTCAATAAGATGATTGCCGAGAATCGCTCGAACGACGTCGGAAAAGGTCAGTTTCTTCTCTCTACCCAAAGCCTAGGTTCTGCAGAACGTGTAGATTCGCAAAACTACCATTCACGGAATGAATCGGGGAAAGCGCCTCTCTTTTTTAGCGAATTTGCTACTGAGAAGCCATCTTTACAATCAGTGAAAAGCCTCTCGCAGGGAAAGCAGGACTATTATGCAGTTAGACATGTGGGAAAGCGTGGTCGAGATTTATTCACCGATGAACCAATCGAGGGCGAAAATAGCAAACTCGGCAGACTAAAAACCAGCCCGCTGTTAAGTACTCAGAGTCAGGGAACACGTGCTATTCGAGCTTTCGCGGCTACAGCGACAATCGATAAATCTCGTGGAGAATACGTCGCACGCCTGCATCGCCATGTAGTTGAGGCTTTAGGCGATGAAGGTGGTGTGGTTCATTTGCTAAGGCCGACGCGTGATCACTATGCCGAAGATAGTACATTGAACTTCTTTACCTTCTGCGAACAAACAGAGCTGGCCAGTTCACTGAACTCCTTAGAAGCTATTTCAGCTAAGAAGGAGGACAGAAAGCCTATTGTATTTACAGATCATAAGTCCCTCGTGGGTCTTTCAAGAACCTCGCGTACAGAAGCGAGTCCGATTGGCCGTTTGGTACAGCAGCCTTATTTCGTTACATCTGACCTGAAACGTGGCGATAAAGTTGTCATTACCGATGACCACATTCAGGCAGGAGGATCTATGCTGGCAATGGAAGCAGCAGCCAAGGAGGCAGGTGTGGACGTGCTTGCTCTTGCAACGCTGAGCGCCCATCCATTTTCACCGCAACTTACCATGTCCTCCGAGGTCAGCGCTTTTTTAGACGAAACCCTAGCAGCTTGGGATCCTCAAGGAAAGGTTACTGAACGCCTTGCCGCAATCGGAATGCCGCGTGAGAAGTTAACCAACAGCGAAGCGATGATTTTAATCGCCTACGCAATAGATCCGGCCAGCGATTCGGCAATCTTAAGATTCGAGACAATTCAAAATAACTTGTTCAAAAGAGCCCATCTTCACAATGTAGGGATAGACCCGGACGCGCCAGATACGCATGAGCAAATGCAAAAACTAAGTTCCATGCAAGAGATGGCAGGGACGGATTCTGCGCGTCACTTCGTAGATGATGCGAAAGTTCTCGAAGGTGAGCATGATTCGCTTATTCCTATCTTGAAAATGAAACCTGCTTCACCTGATGAAATCGTGAAAGAGCTCGACCAAGTTAGTTTGGGGAGCCGTTCCTCAATCCAAGCGTCTGAGGTAAAACAGGTCGTCGTATTGGATTGGGACGACTGTCTGCGTGACGAAAAAGGATTGAATTATAAGCTTATGCATAACGCGTTGGCTATCACAGCAAGGGAACATGCGTCGACATTGCCTGAACTCGGAGATGCCGTAGCGGTCCTGCACAGCAAGTTGAACGATGCAGAACCGGTCGACGAGGAAGCGCCATTGCTGATGAAAAATCAAAAAGACTTTTCATCTTATTTGATGGGTAGGCAAAGCATATATAAGCGCCACATAATTGAAGATTTTGTTCGGAAAATGCTCCCAGGAATTTCTGAGCATAAAGCAGCGTCGATAAATAATGCCGTATACTCTAACTTTGTCCGCGAATATAAAATGCTAGTAAAGCCGGAAGTTTCGAAAAAAAATTATAGTCGAGATGTTCCGTTCCCGGATATTGAGCTTTCCCTACTTCCTGGCGCAAAAGAAATTCTGGAGAAATCACGCAATGCGAATTCTCGCGTCATATTGATCAGTAATCGCGGCCATGGCGATTTGGAAAACGAGATCAATCATCTTGGCATGATGCACTACTTTGACGTGGTGTCCGGCGCGGAAGAAGTCACCCTTGAAAAGTCGCATTTGCCCCCTTCTCAAATGCCTGAAGATTTGCAGAAGCGACTTATCAATTCATTGAATGGCAGTGACGAAGAAGCACTACGGGCTACTCTTTCAGAGGCAGCAATTTACGCCCATCCGGATTCCACGACCATTGAACGGATCGACAAAAAACCAGATTCAACGAGATTGGCAGAGAGCCTTGAGCGGCTCTCGGTTCAACCTAATGTGCCGATAACCTCTTACGGCGATCAACCCTCCGATATCAAGCAATTAAAGAGTGTTGCGGAGCCAAAGAGCCGTGTACTCAAGGGGGTGATCGTCAACGCGCAGCGTGACGACGTGGGCAGGGAAATTGATGTCGACGGGGTGCCAACCCGTGTTGTATCTAAAATCACGGAACTTTAG
Protein sequence:
MKPSSASKSHYTGQFPQGDLQPKTPIPVGRNSEIPKDAALSAQLKGLRPLDRKPSKMPTSSSDLQAVNKMIAENRSNDVGKGQFLLSTQSLGSAERVDSQNYHSRNESGKAPLFFSEFATEKPSLQSVKSLSQGKQDYYAVRHVGKRGRDLFTDEPIEGENSKLGRLKTSPLLSTQSQGTRAIRAFAATATIDKSRGEYVARLHRHVVEALGDEGGVVHLLRPTRDHYAEDSTLNFFTFCEQTELASSLNSLEAISAKKEDRKPIVFTDHKSLVGLSRTSRTEASPIGRLVQQPYFVTSDLKRGDKVVITDDHIQAGGSMLAMEAAAKEAGVDVLALATLSAHPFSPQLTMSSEVSAFLDETLAAWDPQGKVTERLAAIGMPREKLTNSEAMILIAYAIDPASDSAILRFETIQNNLFKRAHLHNVGIDPDAPDTHEQMQKLSSMQEMAGTDSARHFVDDAKVLEGEHDSLIPILKMKPASPDEIVKELDQVSLGSRSSIQASEVKQVVVLDWDDCLRDEKGLNYKLMHNALAITAREHASTLPELGDAVAVLHSKLNDAEPVDEEAPLLMKNQKDFSSYLMGRQSIYKRHIIEDFVRKMLPGISEHKAASINNAVYSNFVREYKMLVKPEVSKKNYSRDVPFPDIELSLLPGAKEILEKSRNANSRVILISNRGHGDLENEINHLGMMHYFDVVSGAEEVTLEKSHLPPSQMPEDLQKRLINSLNGSDEEALRATLSEAAIYAHPDSTTIERIDKKPDSTRLAESLERLSVQPNVPITSYGDQPSDIKQLKSVAEPKSRVLKGVIVNAQRDDVGREIDVDGVPTRVVSKITEL
Protein structure:
AlphaFold
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Main properties of effector
Molecular weight Sequence length Theoretical pI GRAVY Instability index
78168.9 834 5.97 -0.471 49.23
Plant infestation information
Experimental plant:
Susceptible plant: Disease name:
Host classification: NCBI Species:
Pathogen-plant protein interaction
Uniprot ID Protein name Gene name Species Protein sequence
No Record found.