Effector profile
| PlantPEAD ID: PlantPEAD40071 | Uniprot ID: A0A3M4W3K8 | Source: Orthologous |
| Localization: Cytoplasmic(Pre) | Pathogen taxonomy ID: 36746 | Pathogen type: Bacteria |
| Species: Pseudomonas cichorii | Strain: ICMP 6917 | Other name: |
| Gene name: | NCBI Gene ID: RBRY01000066 | |
| Entry name: A0A3M4W3K8_PSECI | Protein name: HopAN1 protein | |
| DOI: | ||
Gene/Protein information
Gene sequence:
TCAAGCTTCTCCTGCCAGTTGCTTGAGGGCTTTGGCGAAGAAGTCACGGGCACCGAAGTTGCCGGACTTGAGTGCCAGCGCCAGCGGTTGTGCGCCGCTGCTGACAGTCGCCGGAACGCCCGGATCGATCTGTGCGCCGATCTGCAGCAGTTGCACGCCGAGCGCCTGAACCACGGCGCCCGACGTTTCGCCACCGGCGACGACAAAGCGACGCACGCCAGCGCCCAGCAAACCTTTGGCGATCTGGCCCAGCGCTTCCTCGACCATGGCGCCGGAGCGTTCGACACCCAGCTCCTTTTGCACGGCCTTGACTTCATCCGGCGTGCTGGTGGCGTAGATCAGAACGGTTTGCCCGGCATCGCGGGCGAAAGCCAGGGCCTGCTCGACCACGGGCTTGCCAGCCGCGAGGTCCAGCGGATTGATGCGCAGGGCAGGGCGGTTGTCTTCCAGCCAGGCCGCGACCTGACCATTGGTGGCCACCGAAGCGCTGCCTGCCAGCACCACTTCGCCACCGCTGACTGCGGCCTGTTTTGCAGCATCGATATCGCGCAGCTTGCCTGCCTTGCGGAAGTTGCCCGGCAGGCCCAGCGCCAGACCCGAACCACCGGTCAGCAGCGGCAGGTCAGCACAGGCTTCGCCCAGTACATAAAGGTCTGCATCGGAAACGGCATCGGCAATGGCCATGCTCACGCCATCGGCGCGCAGCTCGGCGATCTTGCTGCGCACGGCTTCTGCGCCCTTGGCCACGGTGTCATAGCGCAACAGGCCGACTTTCTTGCTGGTCTGTTCCTGCAGGACACGCACCAGATTGGCGTCAGTCATTGGGGTCAGCGGGTGATTCTGCATGCCGGATTCGTTGAGCAGTTGATCCTGCACGAACAGATGGCCACGGAAGATCGTGCGACCGTTTTCCGGGAACGCAGGGCACGCCAAGGTGAAGTCACTGCCGAGTTTTTCCAGCAGGGCTTCGCTGACCTGGCCGATGTTACCAGCGGCTGTCGAGTCGAAGGTCGAGCAGTATTTGAAGAAGATCTGCTCACAGCCGCGTTCGCGCAGCCATTCGAGTGCAGCCAGCGATTCATCGATGGCTTCGGCGGTGGGTGTGGTGCGTGACTTGAGCGCGATCACGATAGCGTCGGCATCAAGACCGGCGGCCATTTCAGCGCTCGGGATACCGATGCTTTGCACGGTGCGCATGCCGCCGCGAACCAGCATGTTGGCCAGGTCCGTGGCACCGGTGAAGTCATCGGCGATGCAGCCCAGCAACGGGCGAGAGGAAGTCGAAGTCAT
Protein sequence:
MTSTSSRPLLGCIADDFTGATDLANMLVRGGMRTVQSIGIPSAEMAAGLDADAIVIALKSRTTPTAEAIDESLAALEWLRERGCEQIFFKYCSTFDSTAAGNIGQVSEALLEKLGSDFTLACPAFPENGRTIFRGHLFVQDQLLNESGMQNHPLTPMTDANLVRVLQEQTSKKVGLLRYDTVAKGAEAVRSKIAELRADGVSMAIADAVSDADLYVLGEACADLPLLTGGSGLALGLPGNFRKAGKLRDIDAAKQAAVSGGEVVLAGSASVATNGQVAAWLEDNRPALRINPLDLAAGKPVVEQALAFARDAGQTVLIYATSTPDEVKAVQKELGVERSGAMVEEALGQIAKGLLGAGVRRFVVAGGETSGAVVQALGVQLLQIGAQIDPGVPATVSSGAQPLALALKSGNFGARDFFAKALKQLAGEA
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Main properties of effector
| Molecular weight | Sequence length | Theoretical pI | GRAVY | Instability index |
|---|---|---|---|---|
| 45145 | 429 | 4.97 | 0.143 | 26.63 |
Plant infestation information
| Experimental plant: | |
| Susceptible plant: | Disease name: |
| Host classification: | NCBI Species: |
Pathogen-plant protein interaction
| Uniprot ID | Protein name | Gene name | Species | Protein sequence |
|---|
No Record found.
External Links
Interpro: IPR010737,IPR037051,IPR031475,IPR042213
Pfam: PF17042,PF07005
SMART:
KEGG:
PRINTS: