Effector profile
PlantPEAD ID: PlantPEAD40076 Uniprot ID: A0A0P9LV18 Source: Orthologous
Localization: Cytoplasmic(Pre) Pathogen taxonomy ID: 86840 Pathogen type: Bacteria
Species: Pseudomonas cannabina Strain: ICMP2823 Other name:
Gene name: NCBI Gene ID: LJPX01000283
Entry name: A0A0P9LV18_PSECA Protein name: Type III effector HopAT1
DOI:
Gene/Protein information
Gene sequence:
ATGGTAAGAATTAATAATTGGAGCAGCAATCTGGATGCCTACAGGATACTCCAAGAAGCGCAAAGTTTGACTGAGGAGCTTCCTCACTTCGATACGGCTTTTCCCATTGAGTCTGAAAGCATTGCGCCACCGGAGCATCACAACCATCGCTACCGTATTGGACAAGATGAGCACCGTGTCAGATATCTTGCTGCAAACAGGAATACGTGCCGCCCCCTCAGCACGTGCGTTCGGAAACGCCAGAGGTAA
Protein sequence:
MVRINNWSSNLDAYRILQEAQSLTEELPHFDTAFPIESESIAPPEHHNHRYRIGQDEHRVRYLAANRNTCRPLSTCVRKRQR
Protein structure:
AlphaFold
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Main properties of effector
Molecular weight Sequence length Theoretical pI GRAVY Instability index
88173.2 82 8.8 -0.963 59.3
Plant infestation information
Experimental plant:
Susceptible plant: Disease name:
Host classification: NCBI Species:
Pathogen-plant protein interaction
Uniprot ID Protein name Gene name Species Protein sequence
No Record found.