Effector profile
PlantPEAD ID: PlantPEAD40081 | Uniprot ID: A0A0P9JKQ8 | Source: Orthologous |
Localization: Cytoplasmic(Pre) | Pathogen taxonomy ID: 86840 | Pathogen type: Bacteria |
Species: Pseudomonas cannabina | Strain: pv. alisalensis ATCC BAA-566 / CFBP 6866 / ICMP 15200 / BS91 | Other name: |
Gene name: | NCBI Gene ID: LJPP01000352 | |
Entry name: A0A0P9JKQ8_PSEC1 | Protein name: Virulence surface antigen protein | |
DOI: |
Gene/Protein information
Gene sequence:
ATGGGCTTGGCAATCCAATGGCTGCGATTGCGTGATGAGGGGGAGGCGAGTTACAGAATGGAGGCGCTGGATCTTGACCATGCTTCGGACATCCAGAACCAATACGAAAATGCAGCAGGTTCAGTGAGCGGGTCGCGGGAGCAGCGAGAAGCAGGTCGAATATCGGCGCGCAAAACCCTTTTGCGAAGTCAAGATTTGCAGCCTGTAGGTGAACCCTCGGTATTCCATGCGGATCGGCAATCGACCGCATTGCAAAAAATTGCGCGCGATGGTAGCGCCCATTTGATCAGCTTGTGCTTTGAAAACAATGGAAAGCGTGTAAGGCATGCCATCACTGCTTCCAGCTCCGAAGGCAGTGTGAACCTCTTTGATCCAAACTATGGCGAGTTCTCTACCACTTTACCGGAGTTGCCTTCGATGTTCCAGAATCTGATGACCAGATACGGCAGTCGACTGAATGGGCACCTGCAATTGGAGAGCATGGTTATTCAGCGTGTGGAGTGA
Protein sequence:
MGLAIQWLRLRDEGEASYRMEALDLDHASDIQNQYENAAGSVSGSREQREAGRISARKTLLRSQDLQPVGEPSVFHADRQSTALQKIARDGSAHLISLCFENNGKRVRHAITASSSEGSVNLFDPNYGEFSTTLPELPSMFQNLMTRYGSRLNGHLQLESMVIQRVE
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Main properties of effector
Molecular weight | Sequence length | Theoretical pI | GRAVY | Instability index |
---|---|---|---|---|
45441.9 | 167 | 5.95 | -0.557 | 39.59 |
Plant infestation information
Experimental plant: | |
Susceptible plant: | Disease name: |
Host classification: | NCBI Species: |
Pathogen-plant protein interaction
Uniprot ID | Protein name | Gene name | Species | Protein sequence |
---|
No Record found.
External Links
Interpro: IPR038765,IPR006473
Pfam: PF03543
SMART:
KEGG:
PRINTS: