Effector profile
| PlantPEAD ID: PlantPEAD40082 | Uniprot ID: A0A3M3R8Q9 | Source: Orthologous |
| Localization: Cytoplasmic(Pre) | Pathogen taxonomy ID: 86840 | Pathogen type: Bacteria |
| Species: Pseudomonas cannabina | Strain: ICMP 15203 | Other name: |
| Gene name: | NCBI Gene ID: RBPJ01000210 | |
| Entry name: A0A3M3R8Q9_PSECA | Protein name: Virulence surface antigen protein | |
| DOI: | ||
Gene/Protein information
Gene sequence:
TCACTCCACACGCTGAATAACCATGCTCTCCAATTGCAGGTGCCCATTCAGTCGACTGCCGTATCTGGTCATCAGATTCTGGAACATCGAAGGCAACTCCGGTAAAGTGGTAGAGAACTCGCCATAGTTTGGATCAAAGAGGTTCACACTGCCTTCGGAGCTGGAAGCAGTGATGGCATGCCTTACACGCTTTCCATTGTTTTCAAAGCACAAGCTGATCAAATGGGCGCTACCATCGCGCGCAATTTTTTGCAATGCGGTCGATTGCCGATCCGCATGGAATACCGAGGGTTCACCTACAGGCTGCAAATCTTGACTTCGCAAAAGGGTTTTGCGCGCCGATATTCGACCTGCTTCTCGCTGCTCCCGCGACCCGCTCACTGAACCTGCTGCATTTTCGTATTGGTTCTGGATGTCCGAAGCATGGTCAAGATCCAGCGCCTCCAT
Protein sequence:
MEALDLDHASDIQNQYENAAGSVSGSREQREAGRISARKTLLRSQDLQPVGEPSVFHADRQSTALQKIARDGSAHLISLCFENNGKRVRHAITASSSEGSVNLFDPNYGEFSTTLPELPSMFQNLMTRYGSRLNGHLQLESMVIQRVE
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Main properties of effector
| Molecular weight | Sequence length | Theoretical pI | GRAVY | Instability index |
|---|---|---|---|---|
| 45478.8 | 148 | 5.93 | -0.561 | 41.61 |
Plant infestation information
| Experimental plant: | |
| Susceptible plant: | Disease name: |
| Host classification: | NCBI Species: |
Pathogen-plant protein interaction
| Uniprot ID | Protein name | Gene name | Species | Protein sequence |
|---|
No Record found.
External Links
Interpro: IPR038765,IPR006473
Pfam: PF03543
SMART:
KEGG:
PRINTS: