Effector profile
PlantPEAD ID: PlantPEAD40088 | Uniprot ID: A0A3M3R9K2 | Source: Orthologous |
Localization: Cytoplasmic(Pre) | Pathogen taxonomy ID: 86840 | Pathogen type: Bacteria |
Species: Pseudomonas cannabina | Strain: ICMP 15203 | Other name: |
Gene name: | NCBI Gene ID: RBPJ01000210 | |
Entry name: A0A3M3R9K2_PSECA | Protein name: Type III effector HopBF1 | |
DOI: |
Gene/Protein information
Gene sequence:
ATGACCAAACACCTGAAAAACCTTGGATTTCCGGTCGTTGATGCGCATTCCTTAGTCAAATACGATAACAAGGTCGGGATAGCAAAAGACTACATTCATCATGCTCTGGACTCCGAAGACGTTATCCATAACCGCAAACACATTCCAACCGACGTGGCTTTCAATAACAACGTTCTGAAGGACTGTGACGAGATCATATCCAGACTCAGAACCCATAGCCTGCACATTGAAGACTTACAGTTCCTGATCGATGGGTATGGTCGGGTGCGAATCAATGACCCACGAGACGTAATCCGGTCTTCGCCAGAGAAGAACATCGCTAAAGTTCGAGCGTTGCGCGCCATTGCGTTGAACAACCTTCTGGACGACGACGATTAA
Protein sequence:
MTKHLKNLGFPVVDAHSLVKYDNKVGIAKDYIHHALDSEDVIHNRKHIPTDVAFNNNVLKDCDEIISRLRTHSLHIEDLQFLIDGYGRVRINDPRDVIRSSPEKNIAKVRALRAIALNNLLDDDD
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Main properties of effector
Molecular weight | Sequence length | Theoretical pI | GRAVY | Instability index |
---|---|---|---|---|
45674.1 | 125 | 6.43 | -0.447 | 51.94 |
Plant infestation information
Experimental plant: | |
Susceptible plant: | Disease name: |
Host classification: | NCBI Species: |
Pathogen-plant protein interaction
Uniprot ID | Protein name | Gene name | Species | Protein sequence |
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No Record found.
External Links
Interpro:
Pfam:
SMART:
KEGG:
PRINTS: