Effector profile
PlantPEAD ID: PlantPEAD40090 Uniprot ID: A0A3M3S1R1 Source: Orthologous
Localization: Cytoplasmic(Pre) Pathogen taxonomy ID: 86840 Pathogen type: Bacteria
Species: Pseudomonas cannabina Strain: ICMP 15203 Other name:
Gene name: NCBI Gene ID: RBPJ01000045
Entry name: A0A3M3S1R1_PSECA Protein name: Type III effector HopV1
DOI:
Gene/Protein information
Gene sequence:
TTACTTTCTATCCGGAATAACTTTTTTCCAGTGCATCAGCAGGTCCTCCCGTAGCATGCCAAGTGCCAGTCTCTGGGTCTTCAGGTCAGGTGAAAAAAACGCTGTATCGAACACAATTCCCATCCGCTTTTGACTTTTTTCCGCTTGCGCCTGTATTTTTTTCGCGTGACCAGGGCTTATATCTGAATAGCTAAATACAGGTAGCAGATAATTCGTAAAACTGTCAGGCAGTTTCTGACCGTTTTTGAGCAAAGCACCTACGTAGCACTCGGCCAGCTGTTGTCCTCCACGCATGCTGCCCGCTTGATACAACTCCCTCTCGGTAATACGTGAGGCAATCTTGGGGTAGATCTGAGCAGCGGCTTTAGCTACTTCACTAATAGCCTGGTCATCGCCGCCAAAGAACGCTTTCAACAACACATCTTCGCCAACTTCGTCTTCGATTCGCCTGGCCGCATCCGGCCAGGAGTCCCCGGTGGACAGCTTGAAACCATGATAGGGATCCTTTGCCAAGGGAATGGGCAAGAGACGCTTAGGGTCTGGCAGTTTCTCTGTCAAACGAGTCGTCAACCCTTCGTTCAGGGCTTTCCAGTGCGGATGTTTTATATGGCGTTCGACAAACTCAGGATGCGTGTAACAGTGTATGAACTCATGTCCGGCGACCTGTGCCGGATGGCTCTCGAAATGAATGTTAGGGTTCAGTTTTACCCGTTGGGTTTTGTGGTTCCACTGCCCTGCCACGCCTGAGGGAACATCGTGTGTGACGTCAGCGCGAGCTTTGAAACATGCACTGTCTTTTGGAATATGTGCACCGAAACGCTCAAGAACCGTCTGATTGCCTTGTTCAAGATGTGTGACGCTAGAGCGATGCTGCAGATTGATTGCTGCCCATACACTGCCTCCCGGATCCTTCGCGAAATCACCTGGGTATCTTGCAAAACGGACTCCTGTCGACAGCGCCAGAGTTCCTACCATCAGTTTAACGAAGAGTCTCACAGGACCTACACCCATTTCTGGACGAACATCAGCAGGTGTAGGCTGATTCACGTCAGCAGGTGCAGTCGTTCCTGCTTCTTCACTGGGCATGCCACCTGCTATCGCTCGCAAACGTAATGATGACGGTGCATCCATAGGGGCTTTGGGCTTCTGGCCTCGGGCAGCATCAAGCCGCATAGGCTCCGGCCCTGCAGGCGCTTCGACATACGGGGCATTATCTACACGAGCACTGTTCCCCACTTTATCCAACAT
Protein sequence:
MLDKVGNSARVDNAPYVEAPAGPEPMRLDAARGQKPKAPMDAPSSLRLRAIAGGMPSEEAGTTAPADVNQPTPADVRPEMGVGPVRLFVKLMVGTLALSTGVRFARYPGDFAKDPGGSVWAAINLQHRSSVTHLEQGNQTVLERFGAHIPKDSACFKARADVTHDVPSGVAGQWNHKTQRVKLNPNIHFESHPAQVAGHEFIHCYTHPEFVERHIKHPHWKALNEGLTTRLTEKLPDPKRLLPIPLAKDPYHGFKLSTGDSWPDAARRIEDEVGEDVLLKAFFGGDDQAISEVAKAAAQIYPKIASRITERELYQAGSMRGGQQLAECYVGALLKNGQKLPDSFTNYLLPVFSYSDISPGHAKKIQAQAEKSQKRMGIVFDTAFFSPDLKTQRLALGMLREDLLMHWKKVIPDRK
Protein structure:
AlphaFold
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Main properties of effector
Molecular weight Sequence length Theoretical pI GRAVY Instability index
26335.1 415 9.02 -0.444 36.5
Plant infestation information
Experimental plant:
Susceptible plant: Disease name:
Host classification: NCBI Species:
Pathogen-plant protein interaction
Uniprot ID Protein name Gene name Species Protein sequence
No Record found.