Effector profile
PlantPEAD ID: PlantPEAD40097 | Uniprot ID: A0A0P9HXZ7 | Source: Orthologous |
Localization: Cytoplasmic(Pre) | Pathogen taxonomy ID: 86840 | Pathogen type: Bacteria |
Species: Pseudomonas cannabina | Strain: pv. alisalensis ATCC BAA-566 / CFBP 6866 / ICMP 15200 / BS91 | Other name: |
Gene name: | NCBI Gene ID: LJPP01000087 | |
Entry name: A0A0P9HXZ7_PSEC1 | Protein name: Ribosomal RNA small subunit methyltransferase E | |
DOI: |
Gene/Protein information
Gene sequence:
TCAAAAATCGCCCCACAGTTGTTGCGCCACGCTCAGCGCAACCACCGGGGCGGTTTCGGTGCGCAGGACTCTCGGGCCGAGGCGGGCGGCGTGGAAGCCGGCGGTTTGTGCCTGATCGACTTCTGCCTCGTTCAAGCCACCTTCAGGGCCGATCAGGAAGGCCAGGCTGGCGGGTTTGGCATGGCTGGTCAGTGGTTCTGCGACCGGGTGCAGCACCAGTTTCAGGTCGGCCTCGGTGAGTCTGATCCAGTCGGCCAGCGGCATCGGTGGATGAATCACCGGCACCACCGAACGACCGCATTGCTCGCACGCACTGATCGCGATCTGCTGCCAATGCGCCTGACGCTTCTCGGCGCGTTCGTCCTTGAGGCGCACTTCGCAGCGCTCGCTGATGATCGGGGTAATCTCGCTGACGCCCAGTTCGGTCGCCTTCTGAATCGCCCAGTCCATGCGCTCACCCCGCGACAAACCCTGACCCAGATGAATGCGCAGGCCTGATTCAACCTGTCCGGCAAAGCTTTCGGTCAATTGCACGCGCACACGTTTCTTGCCGACTTCCAGCAGCGTGCCGCGAAACTCCAGGCCTGAACCGTCGAACAGTTGCAGCGCATCGCCCTCGGTCATGCGCAATACGCGGCTGATGTAATGCGCCTGGGCTTCAGGCAGTTCGTGTTCGCCCAGGCTCAGCGGCGTTTCAGTGAAAAAGCGGGACAGTCTCAT
Protein sequence:
MRLSRFFTETPLSLGEHELPEAQAHYISRVLRMTEGDALQLFDGSGLEFRGTLLEVGKKRVRVQLTESFAGQVESGLRIHLGQGLSRGERMDWAIQKATELGVSEITPIISERCEVRLKDERAEKRQAHWQQIAISACEQCGRSVVPVIHPPMPLADWIRLTEADLKLVLHPVAEPLTSHAKPASLAFLIGPEGGLNEAEVDQAQTAGFHAARLGPRVLRTETAPVVALSVAQQLWGDF
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Main properties of effector
Molecular weight | Sequence length | Theoretical pI | GRAVY | Instability index |
---|---|---|---|---|
26943 | 239 | 5.93 | -0.169 | 40.5 |
Plant infestation information
Experimental plant: | |
Susceptible plant: | Disease name: |
Host classification: | NCBI Species: |
Pathogen-plant protein interaction
Uniprot ID | Protein name | Gene name | Species | Protein sequence |
---|
No Record found.
External Links
Interpro: IPR029028,IPR015947,IPR006700,IPR046886,IPR046887,IPR029026
Pfam: PF04452,PF20260
SMART:
KEGG:
PRINTS: