Effector profile
PlantPEAD ID: PlantPEAD40101 | Uniprot ID: A0A2W5F5P9 | Source: Orthologous |
Localization: Cytoplasmic(Pre) | Pathogen taxonomy ID: 1176649 | Pathogen type: Bacteria |
Species: Agrobacterium fabrum | Strain: S2_009_000_R2_73 | Other name: Agrobacterium tumefaciens |
Gene name: | NCBI Gene ID: QFOL01000128 | |
Entry name: A0A2W5F5P9_9HYPH | Protein name: Ribosomal RNA small subunit methyltransferase E | |
DOI: |
Gene/Protein information
Gene sequence:
TCAGTTCCAGTCGCCGATTGCCGCCTGAATGACCGCGAGTGCTGCGACGGCCGCCGTATCGGCCCTCAGGATACGCGGCCCGAGCGGAATGGGCGTGACGAAGGCAAGGCTGCGCAGCAACTCCCTTTCGTCTTCGGAAAACCCGCCTTCCGGCCCGACCAGCAGGGCGATCTTGCGTTCCTTGACGGATTGCAGGATGGGCAGCGGATTCTGGCCCGCATCGCCCTCGTCGCAATAGATGATGCGGCGGTCGCCGGGCCAGGTTTCCAGCAAGTCCTGCAGTTTCACCGGTTCGGCCACCTCGGGAAGAGACAGTATGCCGCACTGCTCGGCGGCCTCGATGGCATTGGCGCGCAGTTTTTCGGTGTTGTGGATCTTGCCCTGGACATGCTGCGTCATCACCGGCTGTAGCAGGCCGGCGCCCATTTCCACCGCCTTCTGCACCAGATAATCCATCCGCCCGACTTTCAGCGGCGCGAAAAGATAATGCAGATCCGGCGCTTCCGGCTGGGGTCTTGTCTGCTCAAGGGGAATGAGCACGACCTTCTTGCGGCTCGGGAAGGAGAGCCTCGCCTTCCATTCGCCATCGCGTCCGTTGAACAGCAGTATTTCCGCGCCGTCGGTCATCCGCAGCACATTGGCGAGATAGTTGAACTGTTCGGTCGTCGTTTCCTGCGCAACGCCGCCTGCGAGGTCGGCGTCAATAAACAGGCGTTGCAT
Protein sequence:
MQRLFIDADLAGGVAQETTTEQFNYLANVLRMTDGAEILLFNGRDGEWKARLSFPSRKKVVLIPLEQTRPQPEAPDLHYLFAPLKVGRMDYLVQKAVEMGAGLLQPVMTQHVQGKIHNTEKLRANAIEAAEQCGILSLPEVAEPVKLQDLLETWPGDRRIIYCDEGDAGQNPLPILQSVKERKIALLVGPEGGFSEDERELLRSLAFVTPIPLGPRILRADTAAVAALAVIQAAIGDWN
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Main properties of effector
Molecular weight | Sequence length | Theoretical pI | GRAVY | Instability index |
---|---|---|---|---|
26332.5 | 239 | 5.12 | -0.105 | 43.71 |
Plant infestation information
Experimental plant: | |
Susceptible plant: | Disease name: |
Host classification: | NCBI Species: |
Pathogen-plant protein interaction
Uniprot ID | Protein name | Gene name | Species | Protein sequence |
---|
No Record found.
External Links
Interpro: IPR029028,IPR015947,IPR006700,IPR046886,IPR046887,IPR029026
Pfam: PF04452,PF20260
SMART:
KEGG:
PRINTS: