Effector profile
PlantPEAD ID: PlantPEAD40102 | Uniprot ID: A0A7Z7FP95 | Source: Orthologous |
Localization: Cytoplasmic(Pre) | Pathogen taxonomy ID: 1176649 | Pathogen type: Bacteria |
Species: Agrobacterium fabrum | Strain: PDC82 | Other name: Agrobacterium tumefaciens |
Gene name: | NCBI Gene ID: FNEW01000001 | |
Entry name: A0A7Z7FP95_9HYPH | Protein name: Ribosomal RNA small subunit methyltransferase E | |
DOI: |
Gene/Protein information
Gene sequence:
ATGCGCGCAAATTTCCGGATGCAACGCCTGTTCATCGAAGCTTCCCTTTCCGAGGGTGTGGCGCAGGAGGCGACGGGCGAACAGTTCAACTATCTCGCCAATGTGCTGCGAATGTCCGACGGCGCGGAAATCCTGCTGTTCAACGGCCGCGACGGCGAATGGAAAGCGAAGCTCTCCTTTCCGAGCCGCAAGAAGATCATCCTCGTTCCGCTTCAACAGACGCGGCCGCAACCGGATGCGGCGGAGCTGCATTATCTCTTCGCGCCGCTGAAAGTCGGGCGCATGGATTATCTGGTGCAGAAGGCGGTGGAGATGGGTGCCGGCCTGCTGCAACCGGTGATGACGCAGCATGTTCAGGGCAAGATCCACAACACCGAAAAACTGCGCGCCAATGCCATCGAGGCCGCCGAACAATGCGGCATTCTGTCCCTGCCCGAAGTGGCAGAGCCGGTGAAGCTGAAAGAGATGCTGGAGACCTGGCCGGAAGACCGTCGCATCATCTATTGCGACGAAGGCGATGAAGGCCAAAATCCGCTGCCGATCCTGCAGGCCGTCAAGGAACGCAAAATCGCGCTGCTGGTCGGCCCGGAAGGCGGTTTTTCCGAGGAGGAACGGGCGTTGCTGCGCAGCCTTGCCTTCGTCACCCCGATCCCGCTCGGGCCGCGTATATTGCGGGCCGATACGGCCGCCGTCGCCGCACTCGCCGTCATTCAGGCTGTTATCGGCGACTGGAACTGA
Protein sequence:
MRANFRMQRLFIEASLSEGVAQEATGEQFNYLANVLRMSDGAEILLFNGRDGEWKAKLSFPSRKKIILVPLQQTRPQPDAAELHYLFAPLKVGRMDYLVQKAVEMGAGLLQPVMTQHVQGKIHNTEKLRANAIEAAEQCGILSLPEVAEPVKLKEMLETWPEDRRIIYCDEGDEGQNPLPILQAVKERKIALLVGPEGGFSEEERALLRSLAFVTPIPLGPRILRADTAAVAALAVIQAVIGDWN
Loading ...
Main properties of effector
Molecular weight | Sequence length | Theoretical pI | GRAVY | Instability index |
---|---|---|---|---|
26746.8 | 245 | 5.57 | -0.113 | 45.15 |
Plant infestation information
Experimental plant: | |
Susceptible plant: | Disease name: |
Host classification: | NCBI Species: |
Pathogen-plant protein interaction
Uniprot ID | Protein name | Gene name | Species | Protein sequence |
---|
No Record found.
External Links
Interpro: IPR029028,IPR015947,IPR006700,IPR046886,IPR046887,IPR029026
Pfam: PF04452,PF20260
SMART:
KEGG:
PRINTS: