Effector profile
PlantPEAD ID: PlantPEAD40103 Uniprot ID: Q7D102 Source: Orthologous
Localization: Cytoplasmic(Pre) Pathogen taxonomy ID: 1176649 Pathogen type: Bacteria
Species: Agrobacterium fabrum Strain: strain C58 / ATCC 33970 Other name: Agrobacterium tumefaciens
Gene name: NCBI Gene ID: AE007869
Entry name: Q7D102_AGRFC Protein name: Ribosomal RNA small subunit methyltransferase E
DOI:
Gene/Protein information
Gene sequence:
TCAGTTCCAGTCGCCGATAACAGCCTGAATGACGGCGAGTGCGGCGACGGCGGCCGTGTCGGCCCGCAATATGCGCGGCCCGAGCGGGATCGGGGTGACGAAGGCAAGGCTGCGCAGCAACGCCCGTTCCTCCTCGGAAAAACCGCCTTCCGGGCCGACCAGCAGCGCGATTTTGCGTTCCTTGACGGCCTGCAGGATCGGCAGCGGATTTTGGCCCGCATCGCCTTCGTCGCAATAGATGATGCGACGGTCTTCCGGCCAGGTCTCCAGCATCTCTTTCAGCTTCACCGGCTCTGCCACTTCGGGCAGGGACAGAATGCCGCATTGTTCGGCGGCCTCGATGGCATTGGCGCGCAGTTTTTCGCTATTGTGGATCTTGCCCTGAACATGCTGCGTCATCACCGGCTGCAACAGGCCAGCACCCATCTCCACCGCCTTCTGCACCAGATAATCCATGCGCCCGACTTTCAGCGGGGCGAAGAGATAATGCAGCTCCGCGGCATCCGGTTGCGGCCGCGTCTGTTCGAGCGGAACGAGGCTAATCTTCTTGCGGCTCGGAAAGGAGAGCTTCGCTTTCCATTCGCCGTCGCGGCCGTTGAACAGCAGGATTTCCGCGCCGTCGGTCATGCGCAGCACATTGGCGAGATAGTTGAACTGTTCGCCCGTCGCCTCCTGCGCCACACCCTCGGAAAGGGAGGCTTCGATGAACAGGCGTTGCAT
Protein sequence:
MQRLFIEASLSEGVAQEATGEQFNYLANVLRMTDGAEILLFNGRDGEWKAKLSFPSRKKISLVPLEQTRPQPDAAELHYLFAPLKVGRMDYLVQKAVEMGAGLLQPVMTQHVQGKIHNSEKLRANAIEAAEQCGILSLPEVAEPVKLKEMLETWPEDRRIIYCDEGDAGQNPLPILQAVKERKIALLVGPEGGFSEEERALLRSLAFVTPIPLGPRILRADTAAVAALAVIQAVIGDWN
Protein structure:
AlphaFold
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Main properties of effector
Molecular weight Sequence length Theoretical pI GRAVY Instability index
26631.5 239 5.28 -0.09 43.2
Plant infestation information
Experimental plant:
Susceptible plant: Disease name:
Host classification: NCBI Species:
Pathogen-plant protein interaction
Uniprot ID Protein name Gene name Species Protein sequence
No Record found.