Effector profile
PlantPEAD ID: PlantPEAD40180 | Uniprot ID: A0A1E1MS97 | Source: Orthologous |
Localization: Apoplastic(Pre) | Pathogen taxonomy ID: 38038 | Pathogen type: Fungi |
Species: Rhynchosporium secalis | Strain: | Other name: |
Gene name: | NCBI Gene ID: FJVC01000522 | |
Entry name: A0A1E1MS97_RHYSE | Protein name: Pectate lyase | |
DOI: |
Gene/Protein information
Gene sequence:
ATGCAGTTCTCCGCCACTATCGCCGTAGCCATCTTGGCCAGTGTGACTGCTGGACAGACACTCAACATCCCAACCAGAGTTGGAAATATCGTATCACTATCGTCTCCAAGTGCGATTTCTGGAGTAGTTGACATGGGCAACAAGGAATTCGATCGCGGACGTGCATGCGACACCGATGCTGATACGGGAAGCAGCTCTGCTGTCTTCATTCTGGCTGATGGGGCGACTCTCAAGAACGTTATCATTGGAGCGAATCAGCTCGAAGGAGTCCACTGCAAGGCATCCTGTACTTTGATCAATGTCTGGTTCCGAGACGTTTGCGAAGATGCCATCTCACTTCTCGGCACGGGGAACGCATTGATTCAAGGAGGTGGTGCCAACGCCGCGAAGGATAAGGTTGTTCAACACAATGGAAAGGGAACAGTAACAATCAAAGATTACACCGTTACGGGGGCTGGCAAGGTCTATCGTGCTTGTGGGAATTGCTCCAACAATGGAGGACCAAGAAAGGTCATCATCACCGGTCTTCGTGCCAAGGGTGTGACCTCTGACATCGCTGGAATTAATAGCAACTATGGCGATACTGCCACTATATCTGGATCTTGTGGAAGCAGCGTCAAGAATGTCTGCCAGGAGTTCAAGGGTGTGGACAAAAGTCAGAAAATCGAGTCGCCAAAGCTGACCACCAAGAACGCTTGCTTAGGTGCTCAGGGAAAGCTCGCTACTCTTCCAGCTTGCTGA
Protein sequence:
MQFSATIAVAILASVTAGQTLNIPTRVGNIVSLSSPSAISGVVDMGNKEFDRGRACDTDADTGSSSAVFILADGATLKNVIIGANQLEGVHCKASCTLINVWFRDVCEDAISLLGTGNALIQGGGANAAKDKVVQHNGKGTVTIKDYTVTGAGKVYRACGNCSNNGGPRKVIITGLRAKGVTSDIAGINSNYGDTATISGSCGSSVKNVCQEFKGVDKSQKIESPKLTTKNACLGAQGKLATLPAC
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Main properties of effector
Molecular weight | Sequence length | Theoretical pI | GRAVY | Instability index |
---|---|---|---|---|
25045.5 | 246 | 8.79 | 0.044 | 23.56 |
Plant infestation information
Experimental plant: | |
Susceptible plant: | Disease name: |
Host classification: | NCBI Species: |
Pathogen-plant protein interaction
Uniprot ID | Protein name | Gene name | Species | Protein sequence |
---|
No Record found.
External Links
Interpro: IPR004898,IPR012334,IPR011050
Pfam: PF03211
SMART:
KEGG:
PRINTS: