Effector profile
PlantPEAD ID: PlantPEAD40181 Uniprot ID: A0A3M4LFP1 Source: Orthologous
Localization: Apoplastic(Pre) Pathogen taxonomy ID: 36746 Pathogen type: Bacteria
Species: Pseudomonas cichorii Strain: Other name:
Gene name: NCBI Gene ID: RBRE01000099
Entry name: A0A3M4LFP1_PSECI Protein name: Pectate lyase
DOI:
Gene/Protein information
Gene sequence:
TCAGACATCCTTATGGTTGGTAGAACCCGGCAGCTTGTCGTAAGGGTGCTCGACGTTCTTCAGGTTGATGCCGCTGGTGGTCAGGTTCAGGCCTTCGCTGTCGCTCTTGACGAAGGAGAACTTGCCGTTTTCAGCGTCAACGTTTTTCAGGTCCAGGTTCCAGTTACCCTGCTGCCCACCGTTGGTGCGCATGAAGGTGCCGAAGTCCTTGGCCTTGAAGTTGTCAACGCTCACGTTGGCGTCGGAGTTGAGCTGGAAGATCTTGTCGTTGGCGCCCTGGGCACTGCTGTTGGTGATGTTCAGGTTGGTGACCTTGGCACCGCCTTCACCCTTCACCGTCAGCGCATCTTCACCGACGTTGGTCCAGTGCACGTTATCGACGTTTACCGCCTTCTCGCTGCCGGCACGAACGTGTACGCCATCAGCGGCGTTTTCACCGAAGGTCACGTTTTTCAGGGTGGCACCTTCAGCCAGCTCGAAGATTGGCTTTTGTCCTTCACCCTGTCCGCCATCACCCAGGCTAGGGCCGGCAGTAAAGGTCTTGCCCTGGCCATCGAACACTTCGCCCGGGCCTACCTTGATCGTTTCGTTGACTACGGTCGGATTGCTCGAAGCAGTCGGGAAGGACACTGGAGTGGACGAACCGGCTGCACCGGTGCTCAC
Protein sequence:
MSTGAAGSSTPVSFPTASSNPTVVNETIKVGPGEVFDGQGKTFTAGPSLGDGGQGEGQKPIFELAEGATLKNVTFGENAADGVHVRAGSEKAVNVDNVHWTNVGEDALTVKGEGGAKVTNLNITNSSAQGANDKIFQLNSDANVSVDNFKAKDFGTFMRTNGGQQGNWNLDLKNVDAENGKFSFVKSDSEGLNLTTSGINLKNVEHPYDKLPGSTNHKDV
Protein structure:
AlphaFold
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Main properties of effector
Molecular weight Sequence length Theoretical pI GRAVY Instability index
22875 220 4.97 -0.53 7.97
Plant infestation information
Experimental plant:
Susceptible plant: Disease name:
Host classification: NCBI Species:
Pathogen-plant protein interaction
Uniprot ID Protein name Gene name Species Protein sequence
No Record found.