Effector profile
PlantPEAD ID: PlantPEAD40190 | Uniprot ID: A0A7G4WI36 | Source: Orthologous |
Localization: Cytoplasmic(Pre) | Pathogen taxonomy ID: 1642459 | Pathogen type: Oomycota |
Species: Phytophthora agathidicida | Strain: | Other name: |
Gene name: PaRXLR47 | NCBI Gene ID: MT503147 | |
Entry name: A0A7G4WI36_9STRA | Protein name: RxLR effector protein | |
DOI: |
Gene/Protein information
Gene sequence:
ATGCGGCTGACTTACGTAGTGCTGCTGCTTGCTGCTACGCTCGTTTCAACCAGCGATGGATTAACAACGGCTGCTGACTCGAAGAAGGTCGAGATGCTTCAGGAGACTGCAGCTGTGCGATCTCTCAGAACTCACCACACTGTGAAGATAACTGCAGACACAGACGACGAAGAGAGAGCGATTTTCACGGGGCTCAATGGCAAACTGGAAAAAGTGGAAAATGCGATTGAGATGCAGAATATGGCGGCGCACGGCGGCTTCAAGATTCAGGAACTCGGAAAGGTGGAGGACCTCGTGAAAAATCCTACGTACGCGAAATGGCTAAAGGACGGAGAAACGCCAAAGACCATCTACAAGCTTTTGGAGTTTGAAGGGAAGGGGCCGGTTGTTATGAAAGACCCGCGCTACATTGAGTACCTGGAATTCGCAAAGCTGTGGCGAGCGAAGAAGGGTACGCTAGCAAAGGAGTCGTGGCAGTTCTGGAAAAAGAATGCATGGTAA
Protein sequence:
MRLTYVVLLLAATLVSTSDGLTTAADSKKVEMLQETAAVRSLRTHHTVKITADTDDEERAIFTGLNGKLEKVENAIEMQNMAAHGGFKIQELGKVEDLVKNPTYAKWLKDGETPKTIYKLLEFEGKGPVVMKDPRYIEYLEFAKLWRAKKGTLAKESWQFWKKNAW
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Main properties of effector
Molecular weight | Sequence length | Theoretical pI | GRAVY | Instability index |
---|---|---|---|---|
18863.8 | 166 | 8.94 | -0.413 | 18.25 |
Plant infestation information
Experimental plant: | |
Susceptible plant: | Disease name: |
Host classification: | NCBI Species: |
Pathogen-plant protein interaction
Uniprot ID | Protein name | Gene name | Species | Protein sequence |
---|
No Record found.
External Links
Interpro: IPR031825
Pfam: PF16810
SMART:
KEGG:
PRINTS: