Effector profile
PlantPEAD ID: PlantPEAD40389 Uniprot ID: A0A3M3QT48 Source: Orthologous
Localization: Cytoplasmic(Pre) Pathogen taxonomy ID: 86840 Pathogen type: Bacteria
Species: Pseudomonas cannabina Strain: Other name:
Gene name: NCBI Gene ID: RBPJ01000338
Entry name: A0A3M3QT48_PSECA Protein name: Type III effector HopPtoA1Pma
DOI:
Gene/Protein information
Gene sequence:
ATGTACATCAACCGCTCCATCAGTTCTCAGTCCAGTATTGGCACGGAGAGCTTCCATTCTGCGCAGTCTGTTGCCTCCAGTTCGGTCAGGGTGCTCAGTGAGGCCGAGCAGACCAAACTGAATGACATCACCCATTACCTGACAGATCATGTATTCGCCGCACACAGGTTACCGGTAAACGATATCAACGTTGATCAGGATGTCGTTCATGCCCACAACGTCGAGATCGGCAAAATAATCAGCGCCCGTGCCCTACGCTTGCTTGATGAGGGCGAAACCGCTCTCAGCATTGGCGAAACCTTTGCCAAGGCAGAGAAGTTCGACCGCATGGCAAGTGCGGCCTCGGGCGCTTTAAGGGCAACACCGTTCGCCGCGGCGTTCGTGCTGCAATACATGCAGCCTGCCATCAACAAGGGCGACTGGTTACCGACGCCGCTCAAGCCCTTGGCCCCGCTCGTGTCCGGCGCCCTATCGGGCGTCATGGACCAGGTCGGCACCGGCGTCATGAACCGCGCGACCGGCGACCTGCATTACCTGAGCACTGCGCCGGAAAAACTGCACGATGCGATGGCTGCCTCGGTAAAACGCCATAAGCCGGGTGTCATGCGTCAGGCTGCGGATCTGGGGATCGCCGTTCAGACCTACACGGCGCGAAATGCGCTGCGTACCGTGCTGGCTCCTGCACTGGCCTCCAGACCTGCAGTGCAGGGTGCGGTAGACATCAGCGTGTCGGCCGCGGGTGGCCTGGTTGCCAACGCAGGTTTTAGCGAGCGCATGCATACGGTGCAGGCGCGTGATCACCTGCGTGGCGGTGCCTTTGTACTCGGCATCAAGGACAAACAACCCAAGGCAGACTTGAGTGAAGAAACCGACTGGCTCGATGCCTACCGGGCGATCAAATCCGCCAGCTACTCCGGTGCAGCGCTCAACGCTGGCAAGCGTGTCGCGGGTCTGCCGCTGGACGTCGCCACCGATGGTTTGAAAGCGGTGAGGAGTCTGGTGTCGGCCACCAGCCTGATGCAAAACGGTCTGGTAATGGCGGGTGGTTTTGCCGGTGTGGGTAAGTTGCAGGAAATGGCGACGAAAAATATCACCCACCCGGCAACCAAGGCAGCCGTCAGCCAACTGACCAATCTTGCAGGTTCAGCCCCGGTTTTTTCAGCCTGGACAACGGCAGCGGTGGCGACGGACCCAGCGGTGAAAAAGGCTGAGTCGTTCTTGCAGGACACGGTGAAAACAACGGTATCCAACGGGACCAGCGCGCTGGCCGACAAAACCGTCAAGCTGGCCAAGGCGGGCATTGACGCGAGCGCCGAAAGGATTGCCACTACCGGGGCGTCCTTGCGTGACACCTTGCGCCGTCGCACGGTGCGTGAGCCTGATATCGAGGAGGGCGGTGTTGCCGCGGGCACGGGTTCGCCGGTTGCAGTGCCTTTCGAGGCAATGCGGCCATAG
Protein sequence:
MYINRSISSQSSIGTESFHSAQSVASSSVRVLSEAEQTKLNDITHYLTDHVFAAHRLPVNDINVDQDVVHAHNVEIGKIISARALRLLDEGETALSIGETFAKAEKFDRMASAASGALRATPFAAAFVLQYMQPAINKGDWLPTPLKPLAPLVSGALSGVMDQVGTGVMNRATGDLHYLSTAPEKLHDAMAASVKRHKPGVMRQAADLGIAVQTYTARNALRTVLAPALASRPAVQGAVDISVSAAGGLVANAGFSERMHTVQARDHLRGGAFVLGIKDKQPKADLSEETDWLDAYRAIKSASYSGAALNAGKRVAGLPLDVATDGLKAVRSLVSATSLMQNGLVMAGGFAGVGKLQEMATKNITHPATKAAVSQLTNLAGSAPVFSAWTTAAVATDPAVKKAESFLQDTVKTTVSNGTSALADKTVKLAKAGIDASAERIATTGASLRDTLRRRTVREPDIEEGGVAAGTGSPVAVPFEAMRP
Protein structure:
AlphaFold
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Main properties of effector
Molecular weight Sequence length Theoretical pI GRAVY Instability index
50550.5 484 9.17 -0.028 40.59
Plant infestation information
Experimental plant:
Susceptible plant: Disease name:
Host classification: NCBI Species:
Pathogen-plant protein interaction
Uniprot ID Protein name Gene name Species Protein sequence
No Record found.