Effector profile
| PlantPEAD ID: PlantPEAD40417 | Uniprot ID: Q3J5J3 | Source: Orthologous |
| Localization: Cytoplasmic(Pre) | Pathogen taxonomy ID: 1063 | Pathogen type: Bacteria |
| Species: Cereibacter sphaeroides | Strain: strain ATCC 17023 / DSM 158 / JCM 6121 / CCUG 31486 / LMG 2827 / NBRC 12203 / NCIMB 8253 / ATH 2.4.1. | Other name: Rhodobacter sphaeroides |
| Gene name: | NCBI Gene ID: CP000143 | |
| Entry name: Q3J5J3_CERS4 | Protein name: Lytic transglycosylase | |
| DOI: | ||
Gene/Protein information
Gene sequence:
ATGCGGCGATTGATCGGTGCATTGGGCGCGGCGGTCGTGGGCTTGGGTCTTGCCTCGGGGCCGACCGCGGGTCTGGCCGATGGGCTGAAGATCCAGCGATCCACGATGAACCGGGCGGGAATCTTCAAGTCGCAGACGCGACTTCTCGACGGGCGCCTGTCGCAGCAGTACGAAAGCTCCACCCGGCTGAAGCCGAAGGTCGAGAAGCTGGCGGCGGCTCTGCCGACGGCGCGCTACAACGGCCGCTACAAGGGCGAGTTCCTCGAATCGGCCAAGTCCGCGGCGCGCAAGCATGGCGTGCCGGAGGATCTCTATCTCCGGCTCGTGCAGCAGGAATCGGGCTGGAACCCCGGCGCGGTCTCGGTGAAGGGCGCCACGGGGCTGGCCCAGCTGATGCCGGGCACGGCGCAGCTTTTGCGGGTGAACATCAACGACCCGCATCAGAATCTCGAGGGCGGGGCGCGGTACCTCAAGATGATGTACAACAAGTTCGGCACCTGGCAGCTCGCGCTTGCCGCCTACAATGCCGGGCCGCAGGCGGTCGAGAAACATTCGGGCATCCCGCCCTACCGCGAGACGCAGAACTATGTGAAGGTCATCTGGGGCAACGGCTGA
Protein sequence:
MRRLIGALGAAVVGLGLASGPTAGLADGLKIQRSTMNRAGIFKSQTRLLDGRLSQQYESSTRLKPKVEKLAAALPTARYNGRYKGEFLESAKSAARKHGVPEDLYLRLVQQESGWNPGAVSVKGATGLAQLMPGTAQLLRVNINDPHQNLEGGARYLKMMYNKFGTWQLALAAYNAGPQAVEKHSGIPPYRETQNYVKVIWGNG
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Main properties of effector
| Molecular weight | Sequence length | Theoretical pI | GRAVY | Instability index |
|---|---|---|---|---|
| 22107.4 | 204 | 10.14 | -0.37 | 22.93 |
Plant infestation information
| Experimental plant: | |
| Susceptible plant: | Disease name: |
| Host classification: | NCBI Species: |
Pathogen-plant protein interaction
| Uniprot ID | Protein name | Gene name | Species | Protein sequence |
|---|
No Record found.
External Links
Interpro: IPR023346,IPR008258
Pfam: PF01464
SMART:
KEGG: rsp:RSP_1794
PRINTS: