Effector profile
| PlantPEAD ID: PlantPEAD40459 | Uniprot ID: A0A3M4W8T1 | Source: Orthologous |
| Localization: Cytoplasmic(Pre) | Pathogen taxonomy ID: 36746 | Pathogen type: Bacteria |
| Species: Pseudomonas cichorii | Strain: | Other name: |
| Gene name: | NCBI Gene ID: RBRY01000054 | |
| Entry name: A0A3M4W8T1_PSECI | Protein name: Lytic murein transglycosylase | |
| DOI: | ||
Gene/Protein information
Gene sequence:
TTGGACCCAAGCATGCCTTCTTGTTTTACCCATCCCTGGCAGTTGCGCCAACTCATCGCCGCCTCCAGCCTTATTGCTCTGGTAGCTTGTGCAGAAAAACCCACTGCTGCCGATGCCACCCCTCTTCAAGCCAGCAAGACCCTGCCTGTTGCGCCCGTAGCGGTGCCGACACCGGCTCTGGTCGTGGATGAAAACCTCACCATCCAGCCCGCCATCAGCTTTGCGGAATGGCAGGCTGGCTTTCGCAATCAGGCACTGAAGGCCGGTATTCGCGCAGACGTCTTCGACCGTGCATTCAGCGGCGTGACGCCGGACATGAGCGTGGTGAAGGCCGACCGCAGCCAACCAGAGTTCAGCCGCCCGGTGTGGGAATACCTGGACGGCGCGATTTCTGCCGCACGGGTACGCAAGGGCCAGGCCCTGCTTTCCCAGTACAGCACCGACCTGCAGAACATCGAGCAACGCTATGGCGTCGACCGTCAGGCACTGGTCGCGGTGTGGGGCATGGAGAGTAACTTCGGACAGTTCCAGGGTTCGCAGTCGGTAATCCGCTCCCTGGCCACACTGGCCTATGAAGGCCGTCGCCCGGACTTCGCCCAGAGCCAGTTGCTGGCGGCGCTGGAAATCCTCCAGCAAGGCGATATAACGCCTGAGAAAATGCTTGGCTCATGGGCTGGCGCCATGGGGCAGACCCAGTTCATACCGACCACCTACAACACCCATGCAGTGGACTTCAACGGAGATGGTCGTCGGGATATCTGGAACACACCGGCCGACGCCCTGGCATCCACCGCTCATTACTTGCAAAGCTCGGGATGGCAGCGTGGCCAGCCGTGGGGCTTCGAAGTGGTATTGAGTTCGGATTTCGACTACGCCCTGGCTGACGCTTCGACCCGCAAGAGCCTGACTGAATGGCAAAAGCTTGGCCTGAAGCTTCCCGACGGCTCGGCACTGCCTCTGGCCTCCAGCCAGCAGCAAGCGGCCCTGCTTCTGCCTGCGGGCTATCGCGGCCCGGCCTTCCTGGTGCTGGACAACTTCCGCGCCATTCTGCGCTACAACAACTCGTCGTCCTATGCCCTGGCCATCAGCCTGCTTTCCGACCGCTTCAAAGGGGCCGGTTACATCGTAGGCAACTGGCCTCGTACAGACCTGCCTCTGAGCCGCTCAGAGCGGATCGAGCTGCAGACCCTGCTGTCGGCCCGCAAGTACGATGCAGGCGCACCAGACGGCATTATCGGTGCCAATACCCGCAAGGCGATTCGCAGTGCCCAGCAGTCCTTTGGCTGGCCAGCCGATGGCTATCCGACTCATGAGCTGCTGAACAACCTGCGCAAGCCCTGA
Protein sequence:
MDPSMPSCFTHPWQLRQLIAASSLIALVACAEKPTAADATPLQASKTLPVAPVAVPTPALVVDENLTIQPAISFAEWQAGFRNQALKAGIRADVFDRAFSGVTPDMSVVKADRSQPEFSRPVWEYLDGAISAARVRKGQALLSQYSTDLQNIEQRYGVDRQALVAVWGMESNFGQFQGSQSVIRSLATLAYEGRRPDFAQSQLLAALEILQQGDITPEKMLGSWAGAMGQTQFIPTTYNTHAVDFNGDGRRDIWNTPADALASTAHYLQSSGWQRGQPWGFEVVLSSDFDYALADASTRKSLTEWQKLGLKLPDGSALPLASSQQQAALLLPAGYRGPAFLVLDNFRAILRYNNSSSYALAISLLSDRFKGAGYIVGNWPRTDLPLSRSERIELQTLLSARKYDAGAPDGIIGANTRKAIRSAQQSFGWPADGYPTHELLNNLRKP
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Main properties of effector
| Molecular weight | Sequence length | Theoretical pI | GRAVY | Instability index |
|---|---|---|---|---|
| 48664 | 446 | 6.92 | -0.217 | 44.87 |
Plant infestation information
| Experimental plant: | |
| Susceptible plant: | Disease name: |
| Host classification: | NCBI Species: |
Pathogen-plant protein interaction
| Uniprot ID | Protein name | Gene name | Species | Protein sequence |
|---|
No Record found.
External Links
Interpro: IPR023346,IPR043426,IPR011970,IPR002477,IPR036365,IPR036366,IPR031304
Pfam: PF01471,PF13406
SMART:
KEGG:
PRINTS: