Effector profile
| PlantPEAD ID: PlantPEAD40462 | Uniprot ID: A0A068LFT8 | Source: Orthologous |
| Localization: Cytoplasmic(Pre) | Pathogen taxonomy ID: 80869 | Pathogen type: Bacteria |
| Species: Paracidovorax citrulli | Strain: | Other name: Acidovorax citrulli |
| Gene name: | NCBI Gene ID: KF944808 | |
| Entry name: A0A068LFT8_PARCI | Protein name: Lytic murein transglycosylase | |
| DOI: | ||
Gene/Protein information
Gene sequence:
ATGCAACGAAGAAACACGACGACCGCCTCCGCCCTCCGTCCCTCCTTCCGCTTCCACGCCGAGCCCGCCAGGCCGTGGTGGCCCGCCGCCGGGGCAGGCCTGCTCTGCGCCCTGCTGGCCGGGTGCGCGGCCCCTCCTCCCGCGGCGGCCGTGCCCGCCGCCCCGCCTGCACCGGCCGCCACACCGGCGGTGCCCCCGGCGCCCCCCCCGGACACGCCGGCCACCATGGCCCCAGCCGCCCAGCCCGCCACGCCGGCGGCCGATGCCGCCCTGCCTTCCGCAGAGGCCGAACAGGCCGGCTTCGCGGAGTGGATCGCGGGCTTTCGCCAGGAAGCCCTGCAGGCCGGCATCCGCCCCGAGGCGGTCGCCGCCGCCCTGGACGGCGCGCAGTGGCTGCCCCAGGTGGTCGAACTCGACCGCTCACAGCCCGAATTCACGCGCACGCCCTGGGCCTACCTGGACAGCGCCGTCTCGCCCACGCGCATCCAGCGCGGCCGCGACGCGCTGGCCGAGCAGCGCGCCGCCCTGGACTCGGCGGCCGCGCGCTATGGCGTGCCCGCCGAGGTCATCACCGCCATCTGGGGCATGGAAAGCAACTACGGATCGAATTTCGGCACCTTCCGCACCGTCGATGCGCTCGCCACGCTGGCCTACGAGGGCCGCCGCCGCGACTGGGCGCGCGGCGAACTGCTGGCCGCGCTGCGCATCATCGACCAGGGCGACATCGCCGCCGACCGCATGATCGGCTCCTGGGCCGGCGCCATGGGCCACACCCAGTTCCTGCCGTCCGTGTTCCTGGGCTATGCAGTGGACGCCGATGGCGACGGCCACCGCGACATCTGGGGCAGCGTCCCGGACGTCGCCGCATCCACGGCGAACTTCCTGTCGCGCATGGGCTGGCAGCCGGGCCAGCCCTGGGGCGTGGAAGTGCGCCTGCCGCCGGGCTTCGACTACGAGCGCGCGGAACTGGCCGTGCGCCACCCGTCCACCCAGTGGGCGGCCGAAGGCGTGCAGGCCATCGATGGCCAGCCCCTGCCCGCGCTGGACGGCGCATCCATCCTCGTGCCCGCGGGCGCGCGCGGCCCGGCCTTCATGGTGGGGCCGAATTTCCGGGTGATCCTGCGCTACAACAACTCCATCAACTACGCCCTGGGCGTGGGCCTGCTCGCGAGCCAGATCGCCGGCGGCCCTGGCGTCACGGCCCCGTGGCCCCGCGACCTGCAGCCGCTGACCCGCACCCAGATTCGCGACCTGCAGAATGCCCTCAACGCACGCGGCTTCGCAGCGGGCACGGCGGACGGGGTGATGGGCCCCGCCACGCGCGCCGGCCTGCGCCGCTTCCAGCAGAGCATCGGGCAGGTGGCGGACGGGTATCCCACGCTCGAGCTGCTGCAGCGACTGCAGGCGCCC
Protein sequence:
MQRRNTTTASALRPSFRFHAEPARPWWPAAGAGLLCALLAGCAAPPPAAAVPAAPPAPAATPAVPPAPPPDTPATMAPAAQPATPAADAALPSAEAEQAGFAEWIAGFRQEALQAGIRPEAVAAALDGAQWLPQVVELDRSQPEFTRTPWAYLDSAVSPTRIQRGRDALAEQRAALDSAAARYGVPAEVITAIWGMESNYGSNFGTFRTVDALATLAYEGRRRDWARGELLAALRIIDQGDIAADRMIGSWAGAMGHTQFLPSVFLGYAVDADGDGHRDIWGSVPDVAASTANFLSRMGWQPGQPWGVEVRLPPGFDYERAELAVRHPSTQWAAEGVQAIDGQPLPALDGASILVPAGARGPAFMVGPNFRVILRYNNSINYALGVGLLASQIAGGPGVTAPWPRDLQPLTRTQIRDLQNALNARGFAAGTADGVMGPATRAGLRRFQQSIGQVADGYPTLELLQRLQAP
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Main properties of effector
| Molecular weight | Sequence length | Theoretical pI | GRAVY | Instability index |
|---|---|---|---|---|
| 49495.9 | 470 | 5.54 | -0.103 | 43.41 |
Plant infestation information
| Experimental plant: | |
| Susceptible plant: | Disease name: |
| Host classification: | NCBI Species: |
Pathogen-plant protein interaction
| Uniprot ID | Protein name | Gene name | Species | Protein sequence |
|---|
No Record found.
External Links
Interpro: IPR023346,IPR043426,IPR011970,IPR002477,IPR036365,IPR036366,IPR031304
Pfam: PF01471,PF13406
SMART:
KEGG:
PRINTS: