Effector profile
PlantPEAD ID: PlantPEAD40545 | Uniprot ID: A0A225VMS6 | Source: Orthologous |
Localization: Cytoplasmic(Pre) | Pathogen taxonomy ID: 4795 | Pathogen type: Oomycota |
Species: Phytophthora megakarya | Strain: | Other name: |
Gene name: | NCBI Gene ID: NBNE01004234 | |
Entry name: A0A225VMS6_9STRA | Protein name: RNA-binding protein | |
DOI: |
Gene/Protein information
Gene sequence:
ATGGCGTGGAGACCGCTAGTGGCGCGGGTGAAGAACTATACGCGCGAGGCTTATGTGCCTCTGCGTGTCATGCTGCACCCCGAGGAGGGGGAGATCTGGGGACGTGCGCTGGGTGTCCAGGGCCCGTGCACATCGGTGGTGGCAGGCAAGTTCAGCGACTTACTGGAGGTGACGGACGATGAGATCGTCATGAAGCCGGTTGAGGAGCGGTCTCAAGCGTTCCAGAAGATGGAGGCGGAGCTGAAGCAGGAGGGGGCTTTCCCGTTCTACCAGGACGAGTTGTACATGGCTCGAACGACGTTCTCCAGTCCGACGCTCTTCAACTACCACCGCGGTGTGGGGCCGTACTTCGGTCTCAGTCAGTTCGCAACGCACCTCAATGGATTCGTGCGGGACAAGGACACTGGCGTTGTGAGTCACGTGTGGATCGCGACTCGTAGCGCCTCTAAGAAGCGCTGGCCTTTGATGCACGACACGATTGTTGGTGGCGGACTGCCTGCAGGAATCTCGGCGCTTGAAAATATGGTAAAAGAAGCCCAGGAAGAGGCGGGACTGGAACCATCCTGGACGCGGAAGCGGTTCGTGGCTGCAGGCAGCATCTCGTACGTATCCAAACACCCCTACGGCCTGACAAACGACACCATGTTTATCTTCGACGTGGAGCTACCGACGGACATTGCGCCAGTGAACCAAGACGGCGAAGTCGAGAGTTTCGATCTACTACCAGTGCAAGACGTGCTTTCGCGCCTGTGGTCGGAGCCCAAGCGCTTCAAGCCAGACGTATGCATCCTGTTGCTCGACTTCTTCATTCGTCATGGCATCCTCACCGCCGACAACTTTGTGGACTACGAAGAACTCCAACGAGAACTGCACAATACCAAGAATCCGTACGACGTGCTCAATCTCTACTTGACTGGAAGCGAGACGATGGCGACTAAGACCAAGGCGAATGCTACAGAGGAGACGGACACGCGGCTGTACGTGCAGAACCTCCCAGCCTACGTAGATTCTGCGCGATTACGCAAGCACTTCGCGGAACAAGGCGAAGTGACGGACGCTTGTGTGATCCGCACGAAGGACGGCACCAAGTCTCGTCGCTTTGGCTTTGTGGGCTTCAAAAGTGCCACTCAAGCGGAACAAGCGCGCAAATTCTTCAATCAGAGCTTCTTTGACACGTGCAAAATCAATGTGCGCGTGGCGCTGGCGAGAGAATCCGATGATATGGAGCGGCCATGGAGCAAATACTCAGTGGGAAGTGGCCGCTATCAGAAACTCCATCCGGATTCGGGTGTCGTGAAGACCGACGAGAAGATTTCTACTGAGAAGAAGGACACAAAGGGCCAAAAGGCGAAAGAGGAGACAAGTGGAGAGTTCCAGGAGTTTATGGAGACCATGCAAGCGCGATCGAAGACTAAATTCTGGGCCAATGACGATGTACAGGGACCAGTGGACGGGAAAACAGCGACGAAAGGTGTCGATGTTGCGGATGCAGAGGACAGTGACGATGAGTACCAAGAACTTAACACGATAAAGTCTGATGATGAAGATGAAAAAAAGAAAGAGAAGAAGAGCAAAAAGACAGAAGCGATGTCTGATATGGACTTCCTGCGCTCCAAGATGAACAAGAACATCGACAAGGACGGCGATGATGACATGGACGACGCTGAATCAGAGGCTGAAGACGATAAACCTACTGCGCGTTTGTTCGTGCGGAATCTGCCATTTACTGCTGTTGAAGAAGACCTTGAGACGCTCTGCTCCACGTATGGACCTGTGGAAGAGGTTCACATGCCACTGGATGATACACGCCGTCGTAAAGGCTACGGCTTCGTGCTTTTCCGCACTACTGTAGACGCCCAAACTGCACTCACAGCTCTGAATGGAATGGCTTTCCAAGGTCGCCGTCTGCATGTGATTTTTGCCCGTTCCAAGCCCGTTAAACTTGACCCAGAAGCTGCTCTTGCAGATCCGAACTTAACGTACAAACAGCACCCGAACTTGACGTACAAACAGTGTAAGGAGTTGGAGCGCCAGATTCAGGCTCAAAAGAAGACGGGTTGGAATGCCTCTTATATTCGTGGAGATGCAACCGTGGGATCGCTCGCTGAGCGCATGGGAGTGAAACGCGGCGAAATTATGGACAAGGAACAGGGTAACATGGCTGTGCGTCTAGCTATTGGAGAAACGATGCTGGTGAAAGAAAACAAAGACTTTTTCGCGAGAGAAGGTGTGGACCTAGACGCCATTGAAGGTGCTCTCGTGAAGAAACCGAACCAGCAGCAGGCTAAGAAGATCGAGCGAAGTACGTCTGTTATCTTGATCAAGAATCTGCCCCACACCACTGACGAAGAGGAGCTGGCACAACTCTTCCGAAAGCACGGCGAAATTGGACGCTTCCTCCTACCGCCATCCAAGACGTTGGCTGTTGTCGAGTTCCTGGAGCCGTCAGAGGCCCGCAAGGCTTTCCGCTCACTAGCATACAAAAAGTATCAGCATGTACCGCTCTATCTGGAGTGGGCTCCTGTCAAGGTGTTTGATAAACCTGCTTCAACTTCTTCGCATGCCAAAACTTCTGCATCTGAGCAGAAGGGTATCAAAACTACTTCAGCTGTCGTACCAGACGTTGACGACGATGGTGATACCGCTGTGGGTGATGCGTGCCACACTATTTGTGTGAAGAATTTGAACTTCTCTACCAAGGAAGCAGCACTGGAGAAGATCTTTGTGCGATGTGGTAAACTACGCAAAGTTACAGTCGCTCGTCGAAAGGACCCGAAGCGTGGCATGCTTTCAATGGGTTTTGGCTTCGTGGAATACGTTGATGCCAAGGACACTGAGCGTGCGCTGCAAACGCTTCACAACACTGTTGTCGATGGTCATGCACTGAACCTGAAACTTTCGCAGAAGAAGGCATCGGCGGCTCCAAAGCGCGCGGCAGGCGAAGTTGACGGTGAAGGACGCAAATCCAAGATCATCGTCCGCAACGTTGCATTTGAGGCAACGAGCAATGAAATTCGTGAGCTGTTTGGTGCATTTGGACAGCTCAAGCGTGTGCGTATGCCCAAGAAATTCGACGGTAGACACCGCGGTTTCGCGTTCGTGGAGTTCCTTACAGAACAAGAAGCTCGCAATGCATTCTCAGCACTTGCCAGTTCACATCTGTACGGCCGACACCTGGTGCTCGAGTGGGCCGAGGATGCAGACGACATTGATACATTGCGAGCGAAGGCTACGCGTGACCTGACCGCCATCAACGATAGTGAGCGCCGCAAACGCATGAAGCGACAGAAAGAGGATGACGAAGACGACATGGACTTTTGA
Protein sequence:
MAWRPLVARVKNYTREAYVPLRVMLHPEEGEIWGRALGVQGPCTSVVAGKFSDLLEVTDDEIVMKPVEERSQAFQKMEAELKQEGAFPFYQDELYMARTTFSSPTLFNYHRGVGPYFGLSQFATHLNGFVRDKDTGVVSHVWIATRSASKKRWPLMHDTIVGGGLPAGISALENMVKEAQEEAGLEPSWTRKRFVAAGSISYVSKHPYGLTNDTMFIFDVELPTDIAPVNQDGEVESFDLLPVQDVLSRLWSEPKRFKPDVCILLLDFFIRHGILTADNFVDYEELQRELHNTKNPYDVLNLYLTGSETMATKTKANATEETDTRLYVQNLPAYVDSARLRKHFAEQGEVTDACVIRTKDGTKSRRFGFVGFKSATQAEQARKFFNQSFFDTCKINVRVALARESDDMERPWSKYSVGSGRYQKLHPDSGVVKTDEKISTEKKDTKGQKAKEETSGEFQEFMETMQARSKTKFWANDDVQGPVDGKTATKGVDVADAEDSDDEYQELNTIKSDDEDEKKKEKKSKKTEAMSDMDFLRSKMNKNIDKDGDDDMDDAESEAEDDKPTARLFVRNLPFTAVEEDLETLCSTYGPVEEVHMPLDDTRRRKGYGFVLFRTTVDAQTALTALNGMAFQGRRLHVIFARSKPVKLDPEAALADPNLTYKQHPNLTYKQCKELERQIQAQKKTGWNASYIRGDATVGSLAERMGVKRGEIMDKEQGNMAVRLAIGETMLVKENKDFFAREGVDLDAIEGALVKKPNQQQAKKIERSTSVILIKNLPHTTDEEELAQLFRKHGEIGRFLLPPSKTLAVVEFLEPSEARKAFRSLAYKKYQHVPLYLEWAPVKVFDKPASTSSHAKTSASEQKGIKTTSAVVPDVDDDGDTAVGDACHTICVKNLNFSTKEAALEKIFVRCGKLRKVTVARRKDPKRGMLSMGFGFVEYVDAKDTERALQTLHNTVVDGHALNLKLSQKKASAAPKRAAGEVDGEGRKSKIIVRNVAFEATSNEIRELFGAFGQLKRVRMPKKFDGRHRGFAFVEFLTEQEARNAFSALASSHLYGRHLVLEWAEDADDIDTLRAKATRDLTAINDSERRKRMKRQKEDDEDDMDF
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Main properties of effector
Molecular weight | Sequence length | Theoretical pI | GRAVY | Instability index |
---|---|---|---|---|
124844 | 1106 | 6.24 | -0.612 | 37.82 |
Plant infestation information
Experimental plant: | |
Susceptible plant: | Disease name: |
Host classification: | NCBI Species: |
Pathogen-plant protein interaction
Uniprot ID | Protein name | Gene name | Species | Protein sequence |
---|
No Record found.
External Links
Interpro: IPR031804,IPR012677,IPR015797,IPR000086,IPR035979,IPR034423,IPR000504,IPR003954
Pfam: PF15916,PF00293,PF00076
SMART: SM00360,SM00361
KEGG:
PRINTS: