Effector profile
| PlantPEAD ID: PlantPEAD40638 | Uniprot ID: A0A5P8PB99 | Source: Orthologous |
| Localization: Apoplastic(Pre) | Pathogen taxonomy ID: 97005 | Pathogen type: Nematoda |
| Species: Heterodera schachtii | Strain: | Other name: Sugarbeet cyst nematode, Tylenchus schachtii |
| Gene name: CLE | NCBI Gene ID: MK746086 | |
| Entry name: A0A5P8PB99_HETSC | Protein name: CLE-like peptide | |
| DOI: | ||
Gene/Protein information
Gene sequence:
CCATGAAAATTTTTCAAAATCCTTATTCAGGGGTGAACCCTCAAAACACTTGACTTAAATTTGATATTGGCTTTAATAAACTGTTAATGATGGGAATGGAAGCAACTCATCGGCTGGGATTGGCACGAATATCAACCAAATTGTCACCACTGGGCTGCTCTTCGCTTCCCTGGCCGCGCCTGGGGCGGAACCGATTGGACCAAACAAGGCTAAAGGAGGAAATGCCGCCGGGTTGGTGCCAACTGATGTGACAAATCGCGCACTGGTATACAAATTAATAGGAACACTAATTGTGCCAAGTTACCGCGAAAATCTCATTTAACACGTGTGACCCCCTCTTCCCGGGCTTATTGAGAATGGGGGGCCTCTCTTAGAAAAGAGGAAAGCGCACCCATACGAGATTTCGCAGATAATGTCACGTACAGAGACTCTGG
Protein sequence:
TVNDGNGSNSSAGIGTNINQIVTTGLLFASLAAPGAEPIGPNKAKGGNAAGLVPTDVTNRAL
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Main properties of effector
| Molecular weight | Sequence length | Theoretical pI | GRAVY | Instability index |
|---|---|---|---|---|
| 5946.58 | 62 | 5.79 | 0.011 | 12.98 |
Plant infestation information
| Experimental plant: | |
| Susceptible plant: | Disease name: |
| Host classification: | NCBI Species: |
Pathogen-plant protein interaction
| Uniprot ID | Protein name | Gene name | Species | Protein sequence |
|---|
No Record found.
External Links
Interpro:
Pfam:
SMART:
KEGG:
PRINTS: