Effector profile
| PlantPEAD ID: PlantPEAD40639 | Uniprot ID: F2WA38 | Source: Orthologous |
| Localization: Cytoplasmic(Pre) | Pathogen taxonomy ID: 97005 | Pathogen type: Nematoda |
| Species: Heterodera schachtii | Strain: | Other name: Sugarbeet cyst nematode, Tylenchus schachtii |
| Gene name: CLE1 | NCBI Gene ID: HM588679 | |
| Entry name: F2WA38_HETSC | Protein name: CLE-like protein | |
| DOI: | ||
Gene/Protein information
Gene sequence:
ATGCCAAACATTTTCAAAATCCTTCTCATTGTGCTCTTTGCCGTCATCTCATTCAGTTCTTCGGCTTCCACTGATGGCAAAAAAACTGCTAATGATGGCAGTGGAAGCAACTCATCAGTTGGGATTGGTACGAAGATCAAACGAATTGTCACCGCTGGGCTGCTCTTCACTTCCCTGGCCACGGGTGGGGCGCAAGCAATTGGGCGAGGCAATGCTCAGGGAGTAAATGCCGCCGGATTGGTGCCATCGCATGTGACCAATCGCTCAATGGCTCCACCACCTCCTCCTGCGCAATTTGAAAAGGGGGCAACTCGAGTAGAAAAAATGAAGGCACATCTACGCGAACTTGCTGAGAAAATGCCGCCGGTCAATGAATCGAAGCGACTGTCACCGAGTGGACCCGACCCACGTCATCATTAA
Protein sequence:
MPNIFKILLIVLFAVISFSSSASTDGKKTANDGSGSNSSVGIGTKIKRIVTAGLLFTSLATGGAQAIGRGNAQGVNAAGLVPSHVTNRSMAPPPPPAQFEKGATRVEKMKAHLRELAEKMPPVNESKRLSPSGPDPRHH
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Main properties of effector
| Molecular weight | Sequence length | Theoretical pI | GRAVY | Instability index |
|---|---|---|---|---|
| 14450.6 | 139 | 10.54 | -0.204 | 47.05 |
Plant infestation information
| Experimental plant: | |
| Susceptible plant: | Disease name: |
| Host classification: | NCBI Species: |
Pathogen-plant protein interaction
| Uniprot ID | Protein name | Gene name | Species | Protein sequence |
|---|
No Record found.
External Links
Interpro:
Pfam:
SMART:
KEGG:
PRINTS: