Effector profile
| PlantPEAD ID: PlantPEAD40655 | Uniprot ID: A0A2P4PD75 | Source: Orthologous |
| Localization: Cytoplasmic(Pre) | Pathogen taxonomy ID: 588596 | Pathogen type: Fungi |
| Species: Rhizophagus irregularis | Strain: strain DAOM 181602 / DAOM 197198 / MUCL 43194 | Other name: Arbuscular mycorrhizal fungus, Glomus intraradices |
| Gene name: | NCBI Gene ID: AUPC02000270 | |
| Entry name: A0A2P4PD75_RHIID | Protein name: RING-type domain-containing protein | |
| DOI: | ||
Gene/Protein information
Gene sequence:
ATGCCAAATCCAACTTTCCAGCGTCGTATGGTCCATCAAAGAAATAGCAATAACAATAGTAATAATCCAAATTTTAGCGGTTCTATGCAAGAAACTGTTAGAGTTTTTGCAAGTGATGAGGAACCTGACGCTACAATTGAGGTACCAGAAAGTTCAGATAGCGAAGTAAATGTAACAACGTCTATTCCCGCAGCTCGTATCCCTTGGAGACCTACTAGACGTCATGAATCACGACAAGATAATAATAATACGCGCGATTCTCATCGTTCTTTTAATTCTCGAGCAGCGCTAGCAGCAATAGCAGCAAGAAGTAGTGCTTCAAATGATAGTCCATTAACCGATGAGCAGATGGCAAGAAGAATGCAAGCATATGAGTACAGCACTATCGATGAACATCAAACTGTTTTAGCCAGACTTCTTGCTGGTGCCGGTCGAGCTCGTACTACTACAAATCGTCGAGATGCAACTTCGGGTCCGTCATCATCATCACGAAGTGATTCTTCCAGGAGGAGTATATCAGCGCGTGGACCAGTTAGATTGCCAGAAATCCTATCTCATGAGCGTCATCATCATGAGGAACGCAGCAATGAACCTCGAAACCGTGGACATGGTTCACGTGGCGGTCAATCTAGAAATGGTGGAAGATCGAGTAGTAGTTATTTACATCATTTTATTCCACATCCTTTATGGGGGAATCTTATTGACTCGGGCGAGATAGAGTTTGATGAAATTTTGGAATTAATTCCCTGGGGTAATGGCATCGCAGCCAATCCAGATAATTATTTGGATGAAGATGAATTTGACTCAAGCTACGAAGGTTTGCTTCGATTATGTGAACGTATAGGAGATGCAAAGCCTAAAGGTGTTCCAGAAGATGTCATAAAAACCCTACCGACGCAAACGTATATACCGGGAAAGAGCAGGACTGTTGAAGAAAGGTGTACAATATGTTTGACAAATTATGAAACCAATGAAAGGCTTAGAGATTTGCCTTGTTCGCATGATTTTCATCAAGACTGTATTGATACGTGGTTTAAAAATTCTGACAAATGTCCAATTTGTCGGCGTAGTATAATAGAAAATTAA
Protein sequence:
MPNPTFQRRMVHQRNSNNNSNNPNFSGSMQETVRVFASDEEPDATIEVPESSDSEVNVTTSIPAARIPWRPTRRHESRQDNNNTRDSHRSFNSRAALAAIAARSSASNDSPLTDEQMARRMQAYEYSTIDEHQTVLARLLAGAGRARTTTNRRDATSGPSSSSRSDSSRRSISARGPVRLPEILSHERHHHEERSNEPRNRGHGSRGGQSRNGGRSSSSYLHHFIPHPLWGNLIDSGEIEFDEILELIPWGNGIAANPDNYLDEDEFDSSYEGLLRLCERIGDAKPKGVPEDVIKTLPTQTYIPGKSRTVEERCTICLTNYETNERLRDLPCSHDFHQDCIDTWFKNSDKCPICRRSIIEN
Loading ...
Main properties of effector
| Molecular weight | Sequence length | Theoretical pI | GRAVY | Instability index |
|---|---|---|---|---|
| 40763.6 | 361 | 6.18 | -0.982 | 61.69 |
Plant infestation information
| Experimental plant: | |
| Susceptible plant: | Disease name: |
| Host classification: | NCBI Species: |
Pathogen-plant protein interaction
| Uniprot ID | Protein name | Gene name | Species | Protein sequence |
|---|
No Record found.
External Links
Interpro: IPR001841,IPR011016,IPR013083
Pfam: PF13639
SMART: SM00184,SM00744
KEGG:
PRINTS: