Effector profile
| PlantPEAD ID: PlantPEAD40822 | Uniprot ID: A0A3M4VIS0 | Source: Orthologous |
| Localization: Cytoplasmic(Pre) | Pathogen taxonomy ID: 36746 | Pathogen type: Bacteria |
| Species: Pseudomonas cichorii | Strain: | Other name: |
| Gene name: | NCBI Gene ID: RBRY01000164 | |
| Entry name: A0A3M4VIS0_PSECI | Protein name: Rhs element Vgr protein | |
| DOI: | ||
Gene/Protein information
Gene sequence:
TCAGATTGCACAGGCACCGTCCTTGCACTTCTCGCATTCTTCACAGAACGGCGCGTTGCGTTTAAGCGTATTGATTTGCGCTGGCGTCAGCACCGCACCTGCTCTGGCGGCATCGGCCTGTTTCAACAATCCGGGCAGCAAAGCCGCTATGCCAGATCCCACGCCCGGGCTGCCGCCGGTATTGACGTTGACCACCGGGCCGCTGATGGTCACGCCACTGGCGTCGATCTTGACGAAGCTGCCACCGGCCTTGAACGTCAGTTCGCTACCGGCTTCCAGGACGATCTTGATGCCGCTGTCGAGGTGAATCTCCTGCCCGGCCTCAATGAACTGCCCCGTCCCGATCTTGACGTGCTGGTTTGCCGCAACAGTCAGGTGGTCATCGGCCCGAGCTTCGACCTTGCGGTCGGCGTAGATCGTGCGATGTTCCTCGGCCTTGAACTCGCTGTAGCTGTTCTGCTCGACGGTGTCGTGGCGTTCGTTGCCGACGCGGATCTTCTGGTCGTGCTCGATGTTCTCGTCCCAGTCGCGCTGGGCGTGGAGGTAGATCTGTTCCTGACCTTTCTTGTCCTCGATGCGCAGTTCGTTGTAACCGCCACCGCCCGGTGAGCTCAGGGTCTTGAAGGTGCTGCGGGTCTTGTTGGCCGGCAGTTCGTAGGGGACGACGTTTTCCTTGTGGTACAGGCAGCCGCTGATCAGCGGCTGGTCGGGGTCGCCTTCCAGGAAGGTCACCAGCACTTCCATTCCGATGCGCGGAATGGCGATGCCGCCGTACTGGGCACCGGCCCAGGCGGACGAGACGCGCAGCCAGCAACTGGTCTTGTCGTCAGCCTGGCCTTCACGGTCCCAGTGGAACTGGACCTTGACGCGGCCGTACTGGTCGCAATGGATCTCTTCGCCTTTCGGCCCGGTGACCACGGCGCTCTGGCTGCCGAGGATGCGGGGTTTGGGGTGCAGCAGCGGCGGGCGGTTCGGCACGTCCCAGGGCGTGGCCTGGAAGCGGTTGCGATAGCCCTGGTGGAAGTCGTCCTTGAGGGCTGTGGTGTCGCTGGTCACCGACTCTTCCAGCAC
Protein sequence:
MLEESVTSDTTALKDDFHQGYRNRFQATPWDVPNRPPLLHPKPRILGSQSAVVTGPKGEEIHCDQYGRVKVQFHWDREGQADDKTSCWLRVSSAWAGAQYGGIAIPRIGMEVLVTFLEGDPDQPLISGCLYHKENVVPYELPANKTRSTFKTLSSPGGGGYNELRIEDKKGQEQIYLHAQRDWDENIEHDQKIRVGNERHDTVEQNSYSEFKAEEHRTIYADRKVEARADDHLTVAANQHVKIGTGQFIEAGQEIHLDSGIKIVLEAGSELTFKAGGSFVKIDASGVTISGPVVNVNTGGSPGVGSGIAALLPGLLKQADAARAGAVLTPAQINTLKRNAPFCEECEKCKDGACAI
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Main properties of effector
| Molecular weight | Sequence length | Theoretical pI | GRAVY | Instability index |
|---|---|---|---|---|
| 38912.6 | 356 | 5.68 | -0.5 | 36.67 |
Plant infestation information
| Experimental plant: | |
| Susceptible plant: | Disease name: |
| Host classification: | NCBI Species: |
Pathogen-plant protein interaction
| Uniprot ID | Protein name | Gene name | Species | Protein sequence |
|---|
No Record found.
External Links
Interpro: IPR006531,IPR017847,IPR006533,IPR037026
Pfam: PF04717
SMART:
KEGG:
PRINTS: