Effector profile
| PlantPEAD ID: PlantPEAD40898 | Uniprot ID: A0AA89UC28 | Source: Orthologous |
| Localization: Cytoplasmic(Pre) | Pathogen taxonomy ID: 66269 | Pathogen type: Bacteria |
| Species: Pantoea stewartii | Strain: | Other name: |
| Gene name: TssM | NCBI Gene ID: JACETZ010000001 | |
| Entry name: A0AA89UC28_9GAMM | Protein name: Type VI secretion system membrane subunit TssM | |
| DOI: | ||
Gene/Protein information
Gene sequence:
ATGCTGAATGTCCTGTTTTCGATACTGACCAGCCGCCTGGCGTGGGGCTTCGTCGGTATCACAGCGTTATCATTTATCATTTGGGTCATCGGCCCGGTGTTCTCGATAGTGGATTCCCGGCCGCTGGAGTCTGAACAGAACCGCATGATCAGTATTGCGCTGCTGTATGTGGTCTGGGGCCTGAGTCAGGCGATTCCACGTCTGTATAACTACTGGCTGAACCGCAAACTGATGTCCAGTCTGGAGACCAGCAAACCGGACGCACCTGAGGAAGAGCGCAAACGCCTGACCAGTGAGGATCAGGTGCTTGCCAGCCGCTTCTCTGAAGCGACAGAAATGCTAAAAAAGGCGCATTTTCAGCGCCAGAGCAGCAAAGGCGCCCCTTTCTGGGCGCAGCGCTTCAGCCATCAGTACCTGTACCAACTGCCGTGGTACATGATTATCGGTGCGCCTGGCGCGGGTAAAACGACGGCGCTGGTGAATTCCGGTTTGCAGTTTCCGTTGGCCGATAAATTTGGCAAAGCGGCCTTACGCGGTATTGGCGGAACACGAAACTGCGACTGGTGGTTTACAAATGAAGCTGTCCTGCTGGATACCGCAGGGCGCTATACCACGCAGGAAAGTCAGCAGGAGCGTGATGCCAGTGAATGGCACCATTTTCTGGCGCTGCTGCGCAAATACCGTGGCCGTCAGCCTGTAAACGGCGTCATTGTGACACTCAGCGTGGCTGATCTGTTGTCGCAATCGCCCGACGCCATGCGTAATCAGGCGATGGCGCTGCGTCAGCGCCTGATGGAACTTCACGATCAACTGGGCATTCGCTTTCCGGTTTATGTGCTGGTCACTAAAGCTGACCTGTTAAAAGGTTTCCGCAGTTATTTTGCCAGCCTGGATAAAACACAGCGCGAACAGATCTGGGGATTTACCTTCCCATGGGCGAAAGCGTCGACAGCGGATTTCGAACTGAGCAGCCAGTTCCAGCAGGAATATGCTCTGTTGCAACAGCGGCTGGATGCCGGGCTGGCGGATGTTCTGCTGGCGGAAAGTGATGCGCAGGCGCGGGCAGAAAGTTATCTGTTCCCACAAGAATTTGCCGCGCTGCGCCCACAGTTGGCTGAAGCGCTGGATATTCTCTTTGCCCGTTCTGATTTCGAAACGCAGTTTGCGCCGCGCGGGATCTATTTCGCCAGCGGCACCCAGGAAGGGCTGCCATTTGACCGTGTGATGGGCGAACTGACACGTGCACTGCACTTGCCGGGCCAGCAGCAGGGCGAGTCAGGTAGCTGGGACAAGGTGGATAAAGAGGCCCCGATTCCGCAGAACAAAGGCCAGAGTTTCTTCCTGAAAGGGGTGCTGGAAAACGTCATCTTTCAGGAGTCGGGCCTGGCGGGCAGCAATCGCTGGTGGGAACTCCGTAATCGCGTAGGGCTCTGGTCGGGCTACCTGGCCTTGCTTATCCTGGTGCTGATTGCGGGGACATTGTGGCTGATCAGCTATAACAAAAATAAAACTTATCTGCAGGAGATGGCGGCCAAAACGCCGCAGGTCGAGCAACTGGGTGACAAACTGCAAAAAGAGGTGAACGGTAACCTGTTTGCGCTGGTCCCTTATCTCAACACGCTGTTGCACCTGCCGGAAAGCGCGTCTTTTTCCCTGGAGCATCCGCCGCTGACGCGTCGCATGGGACTGTATCGGGGTACGGAAGTGAGTGACGCCACGCAGGCGTTATACGATCGCGCACTTAAACAACTGTTGATGCCACAAGTGGCGCAAAATATTACCCGCTGGTTACGCAATGACAACGGCAGCGATGCCGATTACAGCTATGAAGCCCTGAAGGCTTATCAGATGCTGTATCAGCCAAAGCACTATGACGGTAAGTTTCTTCAGGCGTGGATGATGTTAAATATCTCCCGTGAAATGCCTCAGGATGTGACGCAGGCGGAGGTGAAACAGCTGGCGTGGCACCTGCAGCAGTTGCTGGAAACACAGATCCAGTCCTCGCCCTATGCGAAGGATGACGCGCTGGTAAAGCGCGAGCAGGCGCTGATTAGTCAGATGCCGCTGTCACAGCGCGTTTACGGACGCCTGAAACGCCTGCTGGAACGCGATAGTGCATTGTCACCCGTGACCCTGGCTGCCCTGGGTGGGCCGCAAAGCGAACTGGTGTTCTCACGTAAAAGCGGTAAATCCGTGAATGAAGGCGTGTCCGGACTTTTCACGCCCGACGGCTACTGGAACCACGTTGATAAAGAGATCGCCCCCGTGACGGATGCCCTCTACAAGGATGATATCTGGGTGCTGGGGGGCGAAACGGCCCATGAAGACAGCAAACAAACCGATATGGCGGTGCGTCAGCTGTATATTCAGGACTATATTCGCCAGTGGGAGCAGTTTCTCAGCGATATCCAGCTCAACAGCAGTGCCGATTTAACGCAGCGTATTAATACCGCACGTCTGTTATCCAGTAACCATTCCCCGCTGCGGCAACTGGTTATTAATTTGAGTAAACAGCTCACGCTGACGCGGGCACAACCTGACGACAAGAGCGCGAAAAACGCCGCAGCCGCGTCAGATAACAGTGCCACGCGCACGTTACAGGCACTGTTTACCTCGCCGCGCTCGAATGGTGAACAGGGTGCGGTGCAGCAAACGCCTGAACAAGCGGTAACGGCCCATTTCGCACCGATTATCGAACTGGCACAGCCATTGCAGCAGGGCAGCAAAGTGCTGGCCGTGGATGATTTCCTGAAGCAGATTGACGATCTCTATCGTTACCTCACGGCCGTACAGGACGCGGCGAACAGCGGAATGCCACCGCCCTCCAGTGATGCGATCAGCCGTCTGCAGGCCAGCGCGGGCCGTTTGCCTGGCTCGCTGCAAAATATGGTCTCCGGTATGGCTGTCGGTGCCAGCAGTGATGCACAGCGTCGCGATATGGATAACGTCCGCAAGCGCATTACCATGGAAGTTGGCAGTTTCTGTCGCCAGGCGATTGCCGGCCGCTATCCTTTAGTGCGCAACGCGCGAAGTGAAGTCACACCTGACGACCTGGCGCGCATGTTTGCGCCAGGCAGCGGACTGATGGACAGCTTCTTCCGGGACAATCTGGCCAGTAAAGTGGATACCACCCGCGCGGCATGGCGTTTCACGCCGGGCATTGATGGTAAAACGTTACCGGGGGGCGAAGCGCTGCTGCGTCCGTTCCAGCAGGCTCAGTCGATTCGCGATGCGTTTTTTGCCAATGGTGCCACCACGCCTTCTTTCCGCGTGACGTTGCGCACGGTAAAAATGGACAACGACATTCTTAATATGACGCTGGACGTGGACGGGCAAATCTTACGCTACAGTCATGGTCCACAGGCGGTGCAGTTAGTCAGCTGGCCCGGTCCGGGGGGAACCAGTCAGGTACGCATGCAACTGGGCCTGACGAATGGCACGACCTCCACGCTGACCACCAGCGGGCCATGGGCGCTTAATCGCTTCTTTGACCGCGCACAGGTCACCTCGGTCGGTGGACTGACGCGCGAAGCCAGCTTTAATGTGGACGGCCATAATGTGACGTTGTCCTTTACGCCGGGCAGCATCAGGAACCCCTTCCAGCTCCCTGCATTTAGCTGTCCCTGA
Protein sequence:
MLNVLFSILTSRLAWGFVGITALSFIIWVIGPVFSIVDSRPLESEQNRMISIALLYVVWGLSQAIPRLYNYWLNRKLMSSLETSKPDAPEEERKRLTSEDQVLASRFSEATEMLKKAHFQRQSSKGAPFWAQRFSHQYLYQLPWYMIIGAPGAGKTTALVNSGLQFPLADKFGKAALRGIGGTRNCDWWFTNEAVLLDTAGRYTTQESQQERDASEWHHFLALLRKYRGRQPVNGVIVTLSVADLLSQSPDAMRNQAMALRQRLMELHDQLGIRFPVYVLVTKADLLKGFRSYFASLDKTQREQIWGFTFPWAKASTADFELSSQFQQEYALLQQRLDAGLADVLLAESDAQARAESYLFPQEFAALRPQLAEALDILFARSDFETQFAPRGIYFASGTQEGLPFDRVMGELTRALHLPGQQQGESGSWDKVDKEAPIPQNKGQSFFLKGVLENVIFQESGLAGSNRWWELRNRVGLWSGYLALLILVLIAGTLWLISYNKNKTYLQEMAAKTPQVEQLGDKLQKEVNGNLFALVPYLNTLLHLPESASFSLEHPPLTRRMGLYRGTEVSDATQALYDRALKQLLMPQVAQNITRWLRNDNGSDADYSYEALKAYQMLYQPKHYDGKFLQAWMMLNISREMPQDVTQAEVKQLAWHLQQLLETQIQSSPYAKDDALVKREQALISQMPLSQRVYGRLKRLLERDSALSPVTLAALGGPQSELVFSRKSGKSVNEGVSGLFTPDGYWNHVDKEIAPVTDALYKDDIWVLGGETAHEDSKQTDMAVRQLYIQDYIRQWEQFLSDIQLNSSADLTQRINTARLLSSNHSPLRQLVINLSKQLTLTRAQPDDKSAKNAAAASDNSATRTLQALFTSPRSNGEQGAVQQTPEQAVTAHFAPIIELAQPLQQGSKVLAVDDFLKQIDDLYRYLTAVQDAANSGMPPPSSDAISRLQASAGRLPGSLQNMVSGMAVGASSDAQRRDMDNVRKRITMEVGSFCRQAIAGRYPLVRNARSEVTPDDLARMFAPGSGLMDSFFRDNLASKVDTTRAAWRFTPGIDGKTLPGGEALLRPFQQAQSIRDAFFANGATTPSFRVTLRTVKMDNDILNMTLDVDGQILRYSHGPQAVQLVSWPGPGGTSQVRMQLGLTNGTTSTLTTSGPWALNRFFDRAQVTSVGGLTREASFNVDGHNVTLSFTPGSIRNPFQLPAFSCP
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Main properties of effector
| Molecular weight | Sequence length | Theoretical pI | GRAVY | Instability index |
|---|---|---|---|---|
| 134975 | 1208 | 8.32 | -0.299 | 41.9 |
Plant infestation information
| Experimental plant: | |
| Susceptible plant: | Disease name: |
| Host classification: | NCBI Species: |
Pathogen-plant protein interaction
| Uniprot ID | Protein name | Gene name | Species | Protein sequence |
|---|
No Record found.
External Links
Interpro:
Pfam:
SMART:
KEGG:
PRINTS: