Effector profile
| PlantPEAD ID: PlantPEAD40899 | Uniprot ID: A0A0P9JV28 | Source: Orthologous |
| Localization: Cytoplasmic(Pre) | Pathogen taxonomy ID: 86840 | Pathogen type: Bacteria |
| Species: Pseudomonas cannabina | Strain: pv. alisalensis strain ATCC BAA-566 / CFBP 6866 / ICMP 15200 / BS91 | Other name: |
| Gene name: | NCBI Gene ID: LJPP01000227 | |
| Entry name: A0A0P9JV28_PSEC1 | Protein name: TssM | |
| DOI: | ||
Gene/Protein information
Gene sequence:
GTGAAGGTTTTTTTCGGTTTTGTCATTCGCTGGCTCGTCCCGCTGCTGGGCTTGATCGCGCTCAGCCTGATCATCTGGTTTGTCGGTCCGCTGCTGGACATCCTGGTCCCGGAAGGTCGCCGCTGGGCGTTGATCACTCTATTGTTCGCGATCTGGATCGGTTACCGGGTGTTTCGCATCATTCAGGTCCGTCGCCAGGCGGCAGCCGTCATGCAGAGCCTGGCCGCCGAGACCGCGCCGGACCCTGCCAGCGTCGCCACCGCCGAGGAACTGGCGACCTTGCGGCAGCGCATGGACGAAGCGCTTACCCTGCTGAAAAAGGCCCGTCTGGGCGGTGATCAGCGGCGTAATCTGTATGAGCTGCCGTGGTACGTGATCATCGGCCCGCCCGGTTCGGGCAAGACCACCGCGCTGGTCAACTCGGGTCTGCATTTTCCACTCGCAGCCCAGCTTGGCGCGGGTGCCGTTCGTGGCGTGGGGGGGACACGCAACTGCGACTGGTGGTTCACCGATCAGGCGGTGCTGCTCGACACCGCAGGTCGCTACACCACTCAGGACAGCCACGCGCAAGTCGACAAGGCAGCATGGCTGGGCTTCCTCGATCTGCTCAAGACCCAGCGTGCGCGTCGGCCCATCGACGGCGCGTTCATTGCCATCAGCCTTTCCGATCTGTTGCTTGGCAGCGATACCGAGCGGGCTGATCATGCCGCCGCGATTCGCCTGCGGATTCAGGAGCTGCACACTCGACTGGGCGTGCGTTTCCCGATCTATCTGATGCTGACCAAGCTCGATCTGGTGCCGGGCTTCATGGAGTTCTTCGATGCGCTGAGCAAGGAAGAGCGCGCTCAAGTCTGGGGCATGACGTTTGCGCTGGACGACGGCAAGAGTGCCGAAGGGCCGCTGCAGGACTTCCAGAAAGAGTTTTCAGCGCTGGAGCAGCGTCTCAATGAACGGTTGGTAGAGCGCCTGCAGCAAGAGCGTGACCCGGCGCGGCGCGACCTGATTTATGGCTTCCCGCAGCAGTTCGCGGCGCTCAGGCAAACGCTGCAAGGCTTTCTGGACGGCGTCTTCAAGCCCAATGCGTTCGAGGAGCGCGCGCTGTTGCGTGGCGTGTATTTCACCAGCGGCACGCAGGAAGGCAGCCCGATCGATCGTCTGATCGGCAGCATGGCCCAGAGCATGAACCTGGATCGACAGCAACTGGCGCGGCAAACCGGCACCGGACGCAGTTATTTCATCGAGCGATTGTTCACCGCCGTAGCGTTTGCCGAGCAGGGGTTGATGGGGGTCGACCCCAAAGTGGAGCGCCGCCGCAAGTGGATCGCCCGCGCTGTGCTGGCTGCAACGGTCGCGGTGGTATTGCTGGTCGGCGCATTGTGGCTGATCAGTTACAACGCCAACCAGCGCTACATCGCGCAGGTGGATCAGAAAGTCGCGCCACTTGGCCAGACCGTCCAGAACCTCAGCCCCGCTCAGCGTGATGTATTGGCGGTACTGCCGCTGCTCAACACGGTCCGCCATCTGGCCAGTGAACCGCCGGACTGGGCGCAAGGGTTGGGCCTGTATCAGGGCGACATGCTCGAGGCCGAGTCGTCCAGCGTCTACCGCAAGCTGCTGATCGCCGTGTTCGCGCCGCGCCTGGTGACACGGCTGGAAGAGCAATTGCACAACGGGGGTTCTTCGGACTTTCTGTATGAGGGCCTGAAGGCTTATCTGATGCTTGCCGACACGGAGCATTACGACCCGGATTTCATCAAAGCCTGGATTGCTCTGGACTGGGACAGCAGCCTGCCCCGCGATCTGCCGCCGGAACAGCGGCTGGCACTGGGCGAGCACTTGCAGGCGCTGTTCGAGCGGCACCCGCCCAAAGCCCGCCTGGATCAGCGCCTGATCGATGACCTGCGCCGCCAATTGCAGCAATTGCCGATGGCGCAGCGCGTTTATGACCGGGTCAAACGGCAGAAACTGCCTGACGGCGTGCCGGATTTTCGCTTGAGCGAAGCCGGTGGCCGTGACGCGGCACTGGTGTTCAGTCGCAAGAGTGGCAAGCCGTTGACTGAGCCGCTCAGTGGCCTGTTCACCGCCAAGGGCTTTCTGCTGAGCAGCCTCAACCAGGCTTCAACGCTGGCAGAAGAACAGTGGGTACTGGGCCGTGATCAGGCTGAACAACTGGATGTGGCCAGCCTGGCTGCCGAAGTGCGTCGCCTGTACTTCCAGGATTACGTGCGCCAGTGGGATGCGTTACTGGCGGACATCGACTTTGTGCCGATTACCAGCGTGGCGCAGGCTGCCGATGTGCTGCGGGTTATCTCGGGGCCGGCTTCGCCCTTGAAAAAACTGCTGTCGGCAGTGGCCAGAGAAACCGACTTGCAGGAAGAGGAGAAACTCCTCGCGGCACAAGGCAAGAAGGTCGATGGCAACGTTGACCAGCTCAAGCAGCGCCTCGGTTCGTTGTTGGGCCAGCAGCAGGCGGCCGCCAGTACTGCGCCGATGGCAGTGGAGGACCCGGTGAGCGCGCATTTTGCCGATCTCAAGGGTCTGGTCAGTAAAGGCGAAGGTGAGCCTGCGGCAATCGATGCGTTGCTGTCCGACATGAACGCGCTTTATGTGCAGGTCAGCGCTATGGTCGGGGCCAGTGGCGATGCGTTGCTCGGTGAGGCGAAAAATCAGGCCACCGCCGCTGCCGCACGGGTCAGCCTCACCGCGGAGCGTCAGCCGCCTCTGGTGCAGGGGCTGGTCAAATCGGTTGTCAGCTCCACGACCAACACGATGATGGGCGGGGTGCGCAATCAGCTCAATGCTGCCTGGGTCAGCGAGGTGGTGAACGTCTATCGCCAGTCACTCAACGGCCGCTATCCGATGTCCCCCGGCAGCACGCGTGACGCGACGCTGGACGATTTCGGTCAGTTCTTCGGTGTCGGTGGCGTGATGGACAGCTATTTCCGCAAATACCTGCAGCCTTATGTCGACACATCTGCCAGCACCTGGCGCTGGCAGCCCGGTGCTGCGCAAAAGCTGGGGATCAATGCGGGCGTGCTGCAAACATTCCAGCGTGCAAGTACGATTCGCGATGCGTTCTTTCGCTCCGGAGGCACTCAGCCGACGGTTCGTTTCGAGCTGAAACCGATCGCCATGGACGCCTCCATCACCCAGTTTCTGCTGGATCTGGATGGTCAGCAGATCAGTTATGACCACGGCCCCAGCCGTCCGGTCGCCATGCAGTGGCCGAACCCGGGCAGTATCGGCGTCGTTCGGCTGTCGATTTCGCCACCGTCTGCCAGTGGACGTTCAGGTGTAACGCTTGATGGGCCCTGGGCCTGGTTTCGCCTGCTGGAACAGTCAGACCTGACGGCAGGCAATGCGCCAGATCGTTTCAATCTGCGACTGCGCGTTGACGGCGCCAGTATCTCTTACGAACTGCGGGCCAACAGCGCATTCAACCCGTTCAAAAGTCGCGTGTTGAGCGGCTTCAGTCTGCCGGAGCGGTTATGA
Protein sequence:
MKVFFGFVIRWLVPLLGLIALSLIIWFVGPLLDILVPEGRRWALITLLFAIWIGYRVFRIIQVRRQAAAVMQSLAAETAPDPASVATAEELATLRQRMDEALTLLKKARLGGDQRRNLYELPWYVIIGPPGSGKTTALVNSGLHFPLAAQLGAGAVRGVGGTRNCDWWFTDQAVLLDTAGRYTTQDSHAQVDKAAWLGFLDLLKTQRARRPIDGAFIAISLSDLLLGSDTERADHAAAIRLRIQELHTRLGVRFPIYLMLTKLDLVPGFMEFFDALSKEERAQVWGMTFALDDGKSAEGPLQDFQKEFSALEQRLNERLVERLQQERDPARRDLIYGFPQQFAALRQTLQGFLDGVFKPNAFEERALLRGVYFTSGTQEGSPIDRLIGSMAQSMNLDRQQLARQTGTGRSYFIERLFTAVAFAEQGLMGVDPKVERRRKWIARAVLAATVAVVLLVGALWLISYNANQRYIAQVDQKVAPLGQTVQNLSPAQRDVLAVLPLLNTVRHLASEPPDWAQGLGLYQGDMLEAESSSVYRKLLIAVFAPRLVTRLEEQLHNGGSSDFLYEGLKAYLMLADTEHYDPDFIKAWIALDWDSSLPRDLPPEQRLALGEHLQALFERHPPKARLDQRLIDDLRRQLQQLPMAQRVYDRVKRQKLPDGVPDFRLSEAGGRDAALVFSRKSGKPLTEPLSGLFTAKGFLLSSLNQASTLAEEQWVLGRDQAEQLDVASLAAEVRRLYFQDYVRQWDALLADIDFVPITSVAQAADVLRVISGPASPLKKLLSAVARETDLQEEEKLLAAQGKKVDGNVDQLKQRLGSLLGQQQAAASTAPMAVEDPVSAHFADLKGLVSKGEGEPAAIDALLSDMNALYVQVSAMVGASGDALLGEAKNQATAAAARVSLTAERQPPLVQGLVKSVVSSTTNTMMGGVRNQLNAAWVSEVVNVYRQSLNGRYPMSPGSTRDATLDDFGQFFGVGGVMDSYFRKYLQPYVDTSASTWRWQPGAAQKLGINAGVLQTFQRASTIRDAFFRSGGTQPTVRFELKPIAMDASITQFLLDLDGQQISYDHGPSRPVAMQWPNPGSIGVVRLSISPPSASGRSGVTLDGPWAWFRLLEQSDLTAGNAPDRFNLRLRVDGASISYELRANSAFNPFKSRVLSGFSLPERL
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Main properties of effector
| Molecular weight | Sequence length | Theoretical pI | GRAVY | Instability index |
|---|---|---|---|---|
| 128451 | 1163 | 8.2 | -0.112 | 35.88 |
Plant infestation information
| Experimental plant: | |
| Susceptible plant: | Disease name: |
| Host classification: | NCBI Species: |
Pathogen-plant protein interaction
| Uniprot ID | Protein name | Gene name | Species | Protein sequence |
|---|
No Record found.
External Links
Interpro: IPR009612,IPR010623,IPR027417,IPR017731,IPR048677,IPR025743
Pfam: PF06761,PF14331,PF06744,PF21070
SMART:
KEGG:
PRINTS: