Effector profile
PlantPEAD ID: PlantPEAD40903 Uniprot ID: A0A3M4LLA5 Source: Orthologous
Localization: Cytoplasmic(Pre) Pathogen taxonomy ID: 36746 Pathogen type: Bacteria
Species: Pseudomonas cichorii Strain: Other name:
Gene name: NCBI Gene ID: RBRE01000083
Entry name: A0A3M4LLA5_PSECI Protein name: Type VI secretion protein IcmF
DOI:
Gene/Protein information
Gene sequence:
TCAGAGTTGCACCGGCATGCGGAAGGAGCGCAGCACGCTCATGTCGAACGGGTTCGGCGTGCGCTGGCTGGTCAGCAAGTAGTTGGCGCGCAGGCCACCCACGTCAGCCTTGAGCACCAGTACATCGCGACCTGTCAGGTATTCGGTCTGCATCAGGTCGAACAGACGGAACAACGACCATGGGCCAGTGTTTTTCTCGATGCCCAGCGGACGACCGGCCATGCGGTCGAGGACCAGGCTGGTGCGACCGTCTTCGGCATCGGTCGGCCACTTGAACGACACCGGCACGATCGGGCCATGACGGTATTCGATGGTCTTGTCGCCCAGCTTGAACTCGGAGCGGCTGACCGCCGGATCGAGCGTGTATGGCTCCAGCTTGAACTGCACTTGCGGCTCGGCCGGGTTATCGGCGAAGAAGCTCTTGCGGATCACCAGCGCGGAGGCCATCTGGTCGAGGTAGACCTTGGATACCGGCAGGCTGTGGCCATCGATGCTGCGCATGCGGTAGCTGCCCGGATCGCCACTGACGAATGGACGCATGTAGTTGTCGAAGAAACGGTCGGCGATGCCCTGAGCCTTGAAGAACTCGCGGAAGTCACTGATCGCCACGTCGCTCGGGCTGTGGGCGTTGAACGGATAGCGCTTGTTGATCGCATTGCCGTAGAAGCTGTACAGCTCGTTCTGGTAGCGCTGGTTCAGGTACTGATAGGCATCGCCGAGCACCAGGCGCCAGCTGTCTTCAGCCAGCACGTTGAACCACACGCCCACCGGACGCGGCAGACGGCCGGATGCGGTGCGCAAGTTGCTCAGCGCATCGCGCTGGCCGCTCATGCGGGTCTTGGCCATTTCAAACGCGGCTTGCTCCGGCGCGCTGGCACGCGCCAGGCTGGCCATCTGCATTTGCAGCTCGTTGAGAGCGGTCAGGGCCGGGGTCAGCTCGGCAGTCGGACCGTTATTGTCATCCAGCAAGCGGTGCAACGGCTCGAAGCGGCTTTGCAGGGATTTCCTCGCGGTGTCCGGCAACTGTTTCGCCAGGGCGTCAGACGCCTTGCCTGCAGCACCAGCCGCCAGTTTGCCGAGATTGCCGCCCTTGTCTGCCAGTTGCCCGGCAGCATCGGCGGCCTGCTCGGCAGTGTCAGCGACTACCGGGAAGCGAGTGTTCTCACGCACTTCCACCAACAGTTGCAGAACCGGCGAGTTGGCCGAAATCAGGCCAGCCAGTTGCGCCGCGCCTTCGCCAAAATCGTTGATTGCCGGCAGCTCGACCTGACCTACCGCTTCACTCCAGTAGTTGGCGTAGTCACGGAAATACAATTGCTCCAGTTCCACCATCAGGCGACGCAAATCCATACCGCTCAGGCCAGTGCCTTCGCCCAGGACCCAGTTGTCGTTGAGGATATTGCTGACCAGCATCGAACCCTGCACCGAGAAGTACTGCTGATAACCCTGCTGGGTGTAGAACCCGGGAATCACATAGTCGGTGCCGACAAACAGCGAGCCCTGTGGGCCGAGGTGCTGGCTCAAGCGGTATTCCGGCAGATTACGGGCCTGCTCGCGCAGCATCCGGTAAACCACGTTGGCCAGCGACTCGCTGCGCAGGATCTGCCGCGCCTGAGCCACCAACTGATCGTTGAGCGGATAGACGAACGGCTGCTTGAGCAGGCGCTCGAAGTGGCTGTTCAAACCGTTCTGCACAGCGGTGTTGCCGGTATAGCGCTGCGACCATTCGGTAGCGACCCAGTCCTTGAGCCATGGCGCGTCACGGCGCTCCTTCATGTTCAGCATCAGGTACGCGCGCAGGCTGTTGAGCAGGCGCTCGCGGTCCTTGGTGTTGGCACGAATCTGCCCTTCCAGCAGGCTTGCAACCCGCGGCAGCAACTGTCCTTCAAGCTCGCGCTCGTAAGCCTCTGCAACCACCGGATTGACGTCTTCGCCCTGATACAGACCGACACGCTCGTGATAGCCGACGTCGCCTTTGTGCGGGAAGACCTGAGTCGCCGCGTAGCTGGTGTCGAGGATCTTGAGCGCCGCCATGGAGTCATCGCGAGCGGTCAGGGCGGAGCGCTGCTGGGTCCAGTTATGGGCCAGGTTGCGCAGGTTTTCCAGGCGTTCGTAGTTGGCCGAGAAACCACCGGCCCACAACACGCCGAACAGCGCCAGCGCTGCCAGTGCGCCGACATACAGGGCACGCTGGCCCCAATGGATGCGGCTACGCTCGCGCTTGTCCAGACCGGCCAGATCGGCCTCGGGGAAGATGACCCGGCTGAGCAAGTGGTGAATGAAGCGCGAACGGCCACTGCGCAGGGTCGGCAACATGCCGGAACTCATGCCCAGGTTGGCGCCGATGCCAGCAGTGCTGGCGTCCATTTCTTCAGTCAGGTGCGGTGCGCTGGTCAGGTAGAAACCGCGCAACTGGCTGACACGCTGATAGCGGTTGCCGGTGAACGCCATGTCGACGAACAGGCACAGACGCTCGCCGATCTGCCCCAGTTGATGCGGGAAGTCGAGAATGCGACCACGGCGCTGAGTGTCGCGCTCCTGGTGCATGCGCATGATCACCTGGCTGTTGAGGCGACGCAGAAGCTCTTCAAACTCGCTGCGCAGCACGGCCACATCGGTGCCGCTCTGCTCTTTGCGGAAGCTGGTGCCGAGCACCTGATCGCTTTCCTCGCGGGTCAGTTGATCAAAGAACTCGTCGAAGCCCAACAGGCTGTCAGCCTTGCTCAGGACCAGATAAACCGGCACGTCGACATGCAGTTTCTGATGCACATCCTGCAGGCGCGCACGCACCTGACGGGCCAGGGTTTCGAGGTGCTGTTCACTGCCGCCCACCAGGGTTTCCACCGGAATGGTCACCAGCACGCCGTTCAACGGGCGATTGCGGCGACGCTTGCGCAGCAGGTCGAGCAAGGTGCTCCAGGCACTGCCGTCGACTTCCGCATCCGGCTGGGTCAGGTAACGGCCAGCGGTGTCGATCAGGACGCCGTGGTCGGCGAAGTACCAGTCGCAATGGCGGGTGCCGAGGGTGTCGCGGGTCAGTTTGCGTTCGATCTTGTTGATCGGAAACTCAAGGCCCGAGAAATCCAGCAGGCTGGTCTTGCCACTGCCCTGCGGACCGATCAGCAGGTACCACGGCAAGTCACTGCGCCAGCGCTCGCTACGGCCGCGATACAGGCTCGACGTCTTCAGGGTTTTCAGTGCGTCCTTGAAACGCGTCTTCAACTCTTTCTGTTCTTCGTCGATCTGCTCTTCGCGGCGGATACGTTCCTGGCCGTCTTCGCTATCTTCGATGGCTTTCTTGCGCACACCGGCGCGCCAGCTGACGAAAACCATCGTCAGGCCCCAGATCAGGAACAGCACGCTGATGGTCAGCAAGCGCGAGGTCGAGCTTTCCCAGAACTTGTAATCATCTACCGCCAGCAACGGCCCGACGAACCACACCAGCAGTGCCAAAAACAGCACCAACAGCAGTGTCCAGACCCAGGTCTTGAGCAGGAATGCCCCGACTTTCTTGAAAAAATTCTTCATCATACGTCCCTGTTCACGGCTGCGACTGCAGCTGGACCGCGGCTGGGTCAAACGGTTGATAAGGTTGCAGAACGGTTTCGCGTTGCTCGCCAAGTACCCAGGCAA
Protein sequence:
MPGYLASNAKPFCNLINRLTQPRSSCSRSREQGRMMKNFFKKVGAFLLKTWVWTLLLVLFLALLVWFVGPLLAVDDYKFWESSTSRLLTISVLFLIWGLTMVFVSWRAGVRKKAIEDSEDGQERIRREEQIDEEQKELKTRFKDALKTLKTSSLYRGRSERWRSDLPWYLLIGPQGSGKTSLLDFSGLEFPINKIERKLTRDTLGTRHCDWYFADHGVLIDTAGRYLTQPDAEVDGSAWSTLLDLLRKRRRNRPLNGVLVTIPVETLVGGSEQHLETLARQVRARLQDVHQKLHVDVPVYLVLSKADSLLGFDEFFDQLTREESDQVLGTSFRKEQSGTDVAVLRSEFEELLRRLNSQVIMRMHQERDTQRRGRILDFPHQLGQIGERLCLFVDMAFTGNRYQRVSQLRGFYLTSAPHLTEEMDASTAGIGANLGMSSGMLPTLRSGRSRFIHHLLSRVIFPEADLAGLDKRERSRIHWGQRALYVGALAALALFGVLWAGGFSANYERLENLRNLAHNWTQQRSALTARDDSMAALKILDTSYAATQVFPHKGDVGYHERVGLYQGEDVNPVVAEAYERELEGQLLPRVASLLEGQIRANTKDRERLLNSLRAYLMLNMKERRDAPWLKDWVATEWSQRYTGNTAVQNGLNSHFERLLKQPFVYPLNDQLVAQARQILRSESLANVVYRMLREQARNLPEYRLSQHLGPQGSLFVGTDYVIPGFYTQQGYQQYFSVQGSMLVSNILNDNWVLGEGTGLSGMDLRRLMVELEQLYFRDYANYWSEAVGQVELPAINDFGEGAAQLAGLISANSPVLQLLVEVRENTRFPVVADTAEQAADAAGQLADKGGNLGKLAAGAAGKASDALAKQLPDTARKSLQSRFEPLHRLLDDNNGPTAELTPALTALNELQMQMASLARASAPEQAAFEMAKTRMSGQRDALSNLRTASGRLPRPVGVWFNVLAEDSWRLVLGDAYQYLNQRYQNELYSFYGNAINKRYPFNAHSPSDVAISDFREFFKAQGIADRFFDNYMRPFVSGDPGSYRMRSIDGHSLPVSKVYLDQMASALVIRKSFFADNPAEPQVQFKLEPYTLDPAVSRSEFKLGDKTIEYRHGPIVPVSFKWPTDAEDGRTSLVLDRMAGRPLGIEKNTGPWSLFRLFDLMQTEYLTGRDVLVLKADVGGLRANYLLTSQRTPNPFDMSVLRSFRMPVQL
Protein structure:
AlphaFold
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Main properties of effector
Molecular weight Sequence length Theoretical pI GRAVY Instability index
137095 1210 8.91 -0.335 39.7
Plant infestation information
Experimental plant:
Susceptible plant: Disease name:
Host classification: NCBI Species:
Pathogen-plant protein interaction
Uniprot ID Protein name Gene name Species Protein sequence
No Record found.