Effector profile
PlantPEAD ID: PlantPEAD40913 Uniprot ID: A0A0B6RV33 Source: Orthologous
Localization: Cytoplasmic(Pre) Pathogen taxonomy ID: 41899 Pathogen type: Bacteria
Species: Burkholderia plantarii Strain: Other name:
Gene name: IcmF1 NCBI Gene ID: CP002580
Entry name: A0A0B6RV33_BURPL Protein name: Type VI secretion system protein IcmF
DOI:
Gene/Protein information
Gene sequence:
TCATTGCGCCCCCTGTGCGTTCGATGCATTGGCGGCCGTGCCCGCGGCGGCCGCGGCCGGTGTCACGCCGGACGTGCCGGCCGGTGCCTGTGCCGTCGCGTTGACGGCGCCGCTCGCGCTGGTGTTCGCCACCGACGAGGGCAGGTGCATGCCGCGCAGGCTCTGCTGCTGCGGGGCATCGCCACCGCCGCTGCCGCCGCCCGAGGGCTGCGAGGTGCTGATGATGCGCATCGTCACCGACACGTTCACGCTGCCCTGCGTCCAGGTCAGGTCGAAGGTGCCGTCCGGGCGACGCGTGCGCTGCGCCGAGTTGATCAGCTTCTCCAGCCCGTAGCGGCCCGGCTCGTTGACGAGCTGCAGCGTGCGGCCGTCGAAGGTGGTCGCGGTGAGCGTGGCGCCCGGCGAGCCTGACGGGTTCGGCCAGACGAAGTTGGTCCACTGCGGCGGCGTGTTGCGGTAGCGCAGCTGCTGGCCGTCGATCGCGATGGTGTACTCGGTCGTGCCGCTGCTCGGCTGCGGCAGGATCTGGAACACCGTCTGCGGTTCGGACGAGGCGCTGCTGGCGGCGGCGCCGCCCGCCAGCGGCGCGACCCAGCTCGCGAAGCCGCCGGTGAAGTCCGGCGTCAGCGCGAGGCCCATGTCGCCCCAGGTGCGAGCGGTCAGCGTGTCGCCGCGGCGCACCGCGAGCGGGCCGAGCGTGGTGCCGACGAACTTCGCGATCGAGCCGTCCGGGCCGAACACCTGGGCGATCTCGGAAGCGGCGGCCTCGACCTTGGCACCCGGCGAGAACGGATACTTGCTCGCCAGCGACGCCTGGAACGGCTGGTAGACCTGCGCGTTCCAGACCTTGTTGACTTCCACCGAGGCCGGCTGGATCACCACCGCGAACGCCTGCATCAGCGGGCGCACCAGCAGCGGGCGCAGCGAGCGGCGCTGCGAGTCGGTCAGGCCGGTCAGCATCTGCTCGTCCACGTACTTCAGCGAATCGGCCAGCTCGGAGCCGCTGCCGTCGAGCGTCTGCTGCATCAGCTGGCGCGCGCCGGGGCCGGGGTCGCCCTGGTTCTTGATCACGTTGAAGCGCGTGCGCACCTTCGAGAGCGAATCCATGTAGCCCTTCAGCATCGACTGGCCGCCGTCGTGGGTCTGCACGATCCGGCCGAGCCCGATGAACTCCTGGCCGATCGGCCCCATCGGCACGTCCACCGGATTGCCGTTGATGTCGATGTTGGCCGCGAGCTGGCCGCCGCGCTGGCGCGAGAACCACTGCTTGACCCAGCCCACCACGCCGGTCTGCGCCTTCCTCAGCGTCACGCTGGCGAGCGAGGGGTTGTCCCACGAGGTCTGCTCGTAGGCGGTCTCGAGGATCTTGCGGATCGGCGAATCCTGCGGGTCGCCGAGCCGGTTCATCGCATCGACGGCCTGCCCGAAGCTGCCGAAGTTCTGCACCGCGATGCCCTGCATGAACTTCTGCCAGTGCTGCGCGTACTCGGTCTTGTACATGCCCACCAGCACCTTCTGGATCTGCTCGGGGCTGCCTTCCAGCGTCAGGTCGTCCTGCGAGGCGGTGTTGAGCACCCAGTCCTTGGCCTGCAGCTCCTTGGTGGCCGCGTCGCGGATCGCCGGCTGCACGTAGTCGAACCACGCGTCGCGCGTGAAGGTGCCGGGGATCGCGTAGCTGCCGGCCACCAGCGAGGCGTTGTCGTCGCCGACGATGCGCGCGACGGTCATCGGCGCGTAGCGCGTCGAGGCGCGCGCCTTGATCTCCTCGTAGACGCGCTGGCGGGCCGGCATGCCGCGCACCACGTGGCGCAGGTTCTCGCGGGTCTGGTCGACCAGCGCGAGGTTCGCGTCGATCATCGGCCAGTCGTTGTCCTGCACGCGCGAGAGGTAGAACGTGATCATCCGCTCGGCGCTGCGGATCATCTCGTCACGAGGCATGTTGCCGCGATTGGTTTCCAGCCAGCCGCGCCAGAAACGCGCGATCTGGTCGGTCAGGTGCGCCTGCTCGACGTGCCGCTTGTCGGACAGCATCAGGTAGGTCTTCAGCGCGTTGTAGGCGTCCTCGACGTTGGTCGGCGAGGCGTCGTTATAGAGCCCGCCCTGCGCGCGGCTGGCCAGCGCGGTCTTGTCCGAGACCGGCACCGCGCCCGATTCGGGCGTGCGCGTCATCGGCGCGAGCTGGTCCGGATGCGCGTTCACGTCCTTCAGGAACGAGGCGAGGTTGTCGGCCACCGGCGCGAGCATGATCTGGCGCACGCCGTTGTAATACTCGGTCAGCAGGTGTTCCTCGAGCCGGTCGCCCTGGTAGAGCCCGAGCGAGACCGCGATCGGCTTGTCGTGGCGGAACTGCTCGAGCTGCTCGATGCGGTCCTCGAGGATGTCCATCGCCTGCAGGCGCGACTGCAGGTCGTTGCGGTTCTGTTCGAGCCTGGCGATGTTGTCGAGGTCGGCCTGCACGTTGGCCACCAACTGCTGGTTGCCGATCGTCGACCAGGTCCAGCCGCCCAGCGCGAGCGCGAGCGCCGCGACGAACGCGAAGAACGTCACGTAGCGCATCCGGGTCTTGGCGGGGCTCGCGAACTGGCGCACCGTCTTGCGGTCCTCGAAGATCACCTTCGAGAACAGGTCGCGCAGGAAGAAGCCGTTCTTCGAGAACGCGCTGTGCGGCTTGGGCAGCGCGGCGCCGTCGAGCGCGAAGCGGGTGGCGATGCGCTGCGCGGCCGCGCTGTTGGTCTCGCCTTCCTGCAGCGCGCTGGTGAAGTAGAAGCCGCGGAAGATCGGCTTGTACTGGAACGGGTTGTTCTCGAACAGCGTGGCCAGGAACGCGCGCAGGGTCGGCTTGATCGAGGCGAATTCGAGCGGGAAGCTCAGCTGGCCCGGCGAGAGGATGTTGCCGCGGCTGATCGACAGCTGCGCGACGCTGATCTCCTTGAGGCCCTCGTAGAGCTCCTCGAAGCGCTCGTCGAACAGGGCCACCACGTCGCGCTTCTCGTCGGGCTCGTAGGGCAGCGTCGCGCCCCACACGCGGTCGTATTCGGCGCGCTCGCTGCTGCTGAAGAACTCGGTGAAGCCGGTGATCAGGTCGGCCTTGGTGAACATCACGTAGACCGGCGCGAACACTTCCAGCTTTTCGGTCAGCTCCTGCACGCGCTGGCGCAGGTTCTTCGCGAGGTTGATGGCGAACTCGGGGCGGCTGCCGGTCAGCTCGGCGATGCTGGCCGTGACGATGATGCCGTTGATCGGCGCCTTCGGGCGGTGCTTCTTGAGCAGGCCGAGAAAGCCGAGCCATTCGGTGCGGTCTTCCTCATGCACCGAGTAGCGGCCCGCGGTGTCGAGCAGGATGCCCTCGGTGGTGAAGAACCAGTCGCAGTTGCGGGTGCCGCCGATGCCGTGGATCACGGCGCTGTTCTTGTCGGCGAACGGGAACTGCAGGCCCGAGTTGATCACCGCGCTGCTCTTGCCCGCCGCCGGGTTGCCGATCACGATGTACCACGGCAGCTCGTAGAGCGCCGAGCCGCCCGAGACCTGGCCGATCTTCGAGCTCTTGATGGTCTTGACCGTGTCGACGAGGCGCGTGCGCAGCGTGTCGAGCTCGGCCTGCTTGGCCGGCTCGACCGGCGCGGCCGTGGCCGCCACCTGGTTGTCGACCTCGGCCTGTTCCTCGAGCATGTCGCCGAGCTTGCGGTTCGCGCGCCGCACCCGCAGCCGCCGGATCAGCTTCACGAGCAGCCACAGCACGACGAGCGCGGCGAGGATCGCGATCGGCCACACGAAGCTGATCTGCAGGGCGTCCGCCGCGATGAACAGGATCGCGGCGAGCGCGATGAACCCGAGGATCGAGAGCGTGCGCGGGTGAGTCAACACGTTGAGGATGCGTTGCAT
Protein sequence:
MQRILNVLTHPRTLSILGFIALAAILFIAADALQISFVWPIAILAALVVLWLLVKLIRRLRVRRANRKLGDMLEEQAEVDNQVAATAAPVEPAKQAELDTLRTRLVDTVKTIKSSKIGQVSGGSALYELPWYIVIGNPAAGKSSAVINSGLQFPFADKNSAVIHGIGGTRNCDWFFTTEGILLDTAGRYSVHEEDRTEWLGFLGLLKKHRPKAPINGIIVTASIAELTGSRPEFAINLAKNLRQRVQELTEKLEVFAPVYVMFTKADLITGFTEFFSSSERAEYDRVWGATLPYEPDEKRDVVALFDERFEELYEGLKEISVAQLSISRGNILSPGQLSFPLEFASIKPTLRAFLATLFENNPFQYKPIFRGFYFTSALQEGETNSAAAQRIATRFALDGAALPKPHSAFSKNGFFLRDLFSKVIFEDRKTVRQFASPAKTRMRYVTFFAFVAALALALGGWTWSTIGNQQLVANVQADLDNIARLEQNRNDLQSRLQAMDILEDRIEQLEQFRHDKPIAVSLGLYQGDRLEEHLLTEYYNGVRQIMLAPVADNLASFLKDVNAHPDQLAPMTRTPESGAVPVSDKTALASRAQGGLYNDASPTNVEDAYNALKTYLMLSDKRHVEQAHLTDQIARFWRGWLETNRGNMPRDEMIRSAERMITFYLSRVQDNDWPMIDANLALVDQTRENLRHVVRGMPARQRVYEEIKARASTRYAPMTVARIVGDDNASLVAGSYAIPGTFTRDAWFDYVQPAIRDAATKELQAKDWVLNTASQDDLTLEGSPEQIQKVLVGMYKTEYAQHWQKFMQGIAVQNFGSFGQAVDAMNRLGDPQDSPIRKILETAYEQTSWDNPSLASVTLRKAQTGVVGWVKQWFSRQRGGQLAANIDINGNPVDVPMGPIGQEFIGLGRIVQTHDGGQSMLKGYMDSLSKVRTRFNVIKNQGDPGPGARQLMQQTLDGSGSELADSLKYVDEQMLTGLTDSQRRSLRPLLVRPLMQAFAVVIQPASVEVNKVWNAQVYQPFQASLASKYPFSPGAKVEAAASEIAQVFGPDGSIAKFVGTTLGPLAVRRGDTLTARTWGDMGLALTPDFTGGFASWVAPLAGGAAASSASSEPQTVFQILPQPSSGTTEYTIAIDGQQLRYRNTPPQWTNFVWPNPSGSPGATLTATTFDGRTLQLVNEPGRYGLEKLINSAQRTRRPDGTFDLTWTQGSVNVSVTMRIISTSQPSGGGSGGGDAPQQQSLRGMHLPSSVANTSASGAVNATAQAPAGTSGVTPAAAAAGTAANASNAQGAQ
Protein structure:
NONE
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Main properties of effector
Molecular weight Sequence length Theoretical pI GRAVY Instability index
141748 1293 7.27 -0.217 37.23
Plant infestation information
Experimental plant:
Susceptible plant: Disease name:
Host classification: NCBI Species:
Pathogen-plant protein interaction
Uniprot ID Protein name Gene name Species Protein sequence
No Record found.