Effector profile
PlantPEAD ID: PlantPEAD40915 Uniprot ID: A0A2J9HDV3 Source: Orthologous
Localization: Cytoplasmic(Pre) Pathogen taxonomy ID: 337 Pathogen type: Bacteria
Species: Burkholderia glumae Strain: Other name: Pseudomonas glumae
Gene name: IcmF NCBI Gene ID: NJFN02000003
Entry name: A0A2J9HDV3_BURGL Protein name: Type VI secretion system membrane subunit TssM
DOI:
Gene/Protein information
Gene sequence:
ATGCAACGCATCCTCAACGTGTTGACTCACCCGCGCACGCTCTCGATCCTCGGGTTCATCGCGCTCGCCGCGATCCTGTTCATCGTGGCGGACGCCCTGCAGATCAGCTTCGTCTGGCCGATCGCGATCCTCGCCGCGCTCGTCGTGCTGTGGCTGCTCGTGAAGCTGGTGCGGCGGCTGCGGGTGAAGCGCGCGAACCGCAAGCTCGGCGACATGCTCGAGGAACAGGCCTCGGTCGAGAGCCCGGCCGCCGCCGCCGCGCCGGTCGAGCCGGCCAAGCAGGCCGAGCTGGACACGCTGCGCACGCGCCTCGTCGATACGGTCAAGACCATCAAGAGCTCGAAGATCGGCCAGGTCTCGGGCGGCTCGGCGCTCTACGAGCTGCCGTGGTACATCGTGATCGGCAACCCGGCGGCGGGCAAGAGCAGCGCGGTGATCAACTCGGGCCTGCAGTTCCCGTTCGCCGACAAGAACAGCGCCGTGATCCACGGCATCGGCGGCACCCGCAACTGCGACTGGTTCTTCACCACCGAGGGCATCCTGCTCGACACCGCGGGCCGCTATTCGGTGCACGAGGAGGACCGCAGCGAATGGCTCGGCTTCCTCGGCCTGCTCAAGAAGCACCGCCCGAAGGCGCCGATCAACGGCATCATCGTCACGGCCAGCATCGCCGAGCTGACCGGCAACCGCCCCGAATTCGCCATCAACCTCGCCAAGAACCTGCGCCAGCGCGTGCAGGAGCTGACCGAGAAGCTCGAGGTGTTCGCGCCGGTCTACGTGATGTTCACCAAGGCCGACCTGATCACCGGCTTCACCGAGTTCTTCAGCAACAGCGACCGCGCCGAGTACGACCGCGTGTGGGGCGCCACGCTGCCCTACGAGCCCGACGAGAAGCGCGACGTGGTGGCGCTCTTCGACGAGCGCTTCGAGGAGCTCTACGACGGCCTCAAGGAGATCAGCGTCGCGCAGCTCGCGATCAGCCGCGGCAACATCCTCTCGCCGGGCCAGCTGAGCTTCCCGCTCGAATTCGCCTCGATCAAGCCCACCCTGCGCGCGTTCCTCGCCACGCTGTTCGAGAACAACCCGTTCCAGTACAAGCCGATCTTCCGCGGCTTCTACTTCACCAGCGCGCTGCAGGAAGGCGAGACCAACAGCGCCGCCGCGCAGCGCATCGCGGCGCGCTTCGCGCTCGACGGCACCGCGCTGCCCAAGCCGCCCAGCGCGTTCTCGAAGAACGGCTTCTTCCTGCGCGACCTGTTCTCGAAGGTGATCTTCGAGGACCGCAAGACGGTGCGCCAGTTCGCGAGCCCCGCCAAGACGCGGATGCGCTACGCGACCTTCTTCGCGTTCGTCGCCGCGCTCGCGCTCGCGCTGGGCGGCTGGACCTGGTCGACGATCGGCAACCAGCAGCTGGTGGCCAACGTGCAGGCCGACCTCGACAACATCGCCAAGCTCGAGCAGAACCGCAACGACCTGCAGTCGCGCCTGCAGGCGATGGACATCCTCGAGGACCGCATCGAGCAGCTCGAGCAGTTCCGCCACGACAAGCCGATCGCGGTCTCGCTCGGGCTCTACCAGGGCGACCGGCTCGAGGAGCACCTGCTGACCGAGTACTACAACGGCGTGCGCCAGATCATGCTCGCGCCGGTGGCCGACAACCTCGCCGCGTTCCTGAAGGACGTGAACGCGCATCCGGACCAGCTCGCGCCGATGACGCGCGCGCCCGAATCGGGCGCGGTGCCGGTCTCGGACAAGACCGCGCTGGCCAGCCGCGCGCAGGGCGGGCTCTACAACGACGCCTCGCCCACCAATGTCGAGGACGCCTACAACGCACTGAAGACCTACCTGATGCTGTCCGACAAGCGGCACGTCGAGCAGGCCCACCTGACCGACCAGATCGCGCGCTTCTGGCGCGGCTGGCTGGAAACCAACCGCGGCAACATGCCTCGTGACGAGATGATCCGCAGCGCCGAGCGGATGATCACGTTCTATCTCTCGCGCGTGCAGGACAACGACTGGCCGATGATCGACGCGAACCTCGCGCTCATCGACCAGACCCGCGAGAACCTGCGCCGCGTGGTGCGCGGCATGCCGGCCCGCCAGCGCGTCTACGAGGAAATCAAGGCGCGCGCCTCGACGCGCTACGCGCCGATGACCGTCGCGCGCATCGTCGGCGACGAGAACGCCTCGCTGGTGGCGGGCAGCTACGCGATCCCCGGCACCTTCACGCGCGACGCCTGGTTCGACTACGTGCAGCCGGCGATCCGCGACGCGGCCACCAAGGAGCTGCAGGCCAAGGACTGGGTGCTCAACACCGCCTCGCAGGACGACCTGACGCTGGAAGGCAGCCCCGAGCAGATCCAGAAGGTGCTGGTGGGCATGTACAAGACCGAGTACGCGCAGCACTGGCAGAAGTTCATGCAGGGCATCGCGGTGCAGAACTTCGGCAGCTTCGGGCAGGCCGTCGATGCGATGAACCGGCTCGGCGACCCGCAGGATTCGCCGATCCGCAAGATCCTCGAGACCGCCTACGAGCAGACCTCGTGGGACAACCCCTCGCTGGCCAGCGTGACGCTGAAGAAGGCGCAGACGGGCGTGGTGGGCTGGGTCAAGCAGTGGTTCTCGCGCCAGCGCGGCGGCCAGCTCGCGGCCAACATCGACATCAACGGCAATCCGGTGGAGGTGCCGATGGGGCCGATCGGCCAGGAGTTCATCGGGCTCGCCCGGATCGTGCAGACCCACGACGGCGGCCAGTCGATGCTGAAGGGCTACATGGAGTCGCTCTCGAAGGTGCGCACGCGCTTCAACGTGATCAAGAACCAGGGCGACCCCGGCCCCGGCGCGCGCCAGCTGATGCAGCAGACGCTCGACGGCAACGGCTCCGAGCTGGCCGATTCGCTGAAGTACGTGGACGAGCAGATGCTGACCGGCCTGACCGACTCGCAGCGCCGCTCGCTGCGGCCGCTGCTGGTGCGTCCGCTGATGCAGGCGTTCGCGGTGGTGATCCAGCCGGCCTCGGTGGAAGTCAACAAGGTCTGGAACGCGCAGGTCTACCAGCCGTTCCAGTCGTCGCTGGCCAACAAGTATCCGTTCTCGCCGGGCGCCAAGGTCGAGGCCGCCGCCTCCGAGATCGCCCAGGTGTTCGGCCCGGACGGCTCGATCGCGAAGTTCGTCGGCACCACGCTCGGCCCGCTCGCGGTGCGCCGCGGCGACACGCTGACCGCGCGCACCTGGGGCGACATGGGCCTGGCGCTGACGCCGGAGTTCACCAACGGCTTCGCGAGCTGGGTCGCGCCGCTGGCGGGCGGCGCCGCCACCAGCTCGGCCTCGTCCGAGCCGCAGACGGTGTTCCAGATCCTGCCGCAGCCGAGCAGCGGCACGACCGAGTACACCATCGCGATCGACGGCCAGCAGCTGCGCTACCGCAACACGCCGCCGCAGTGGACCAACTTCGTCTGGCCGAATCCGTCGGGCTCGCCGGGCGCCACGCTGTCGGCGACCACCTTCGACGGCCGCACGCTGCAGCTCGTCAACGAGCCGGGCCGCTACGGGCTGGAGAAGCTGATCAACTCGGCGCAGCGCACGCGCCGCCCGGACGGCACCTTCGACCTGACGTGGACGCAGGGCGGCGTGAGCGTGTCGGTGACGATGCGCATCATCAGCACCTCGCAGCCGTCGGGCGGCGGCAGCGGCGGCGACGCCCCGCAGCAGCAGAGCCTGCGCGGCATGCACCTGCCCTCGTCGGTGGCCAACACCAGCGCGAGCGGCGCCATCAACGCGACGGCACAGGCGCCGGCCGCCACGTCCGGCGTGAGCCCGGCCGCGGCCGCCACGGGCGCGGCTGCCAACGCATCGAACGCACAGGGGGCGCAATGA
Protein sequence:
MQRILNVLTHPRTLSILGFIALAAILFIVADALQISFVWPIAILAALVVLWLLVKLVRRLRVKRANRKLGDMLEEQASVESPAAAAAPVEPAKQAELDTLRTRLVDTVKTIKSSKIGQVSGGSALYELPWYIVIGNPAAGKSSAVINSGLQFPFADKNSAVIHGIGGTRNCDWFFTTEGILLDTAGRYSVHEEDRSEWLGFLGLLKKHRPKAPINGIIVTASIAELTGNRPEFAINLAKNLRQRVQELTEKLEVFAPVYVMFTKADLITGFTEFFSNSDRAEYDRVWGATLPYEPDEKRDVVALFDERFEELYDGLKEISVAQLAISRGNILSPGQLSFPLEFASIKPTLRAFLATLFENNPFQYKPIFRGFYFTSALQEGETNSAAAQRIAARFALDGTALPKPPSAFSKNGFFLRDLFSKVIFEDRKTVRQFASPAKTRMRYATFFAFVAALALALGGWTWSTIGNQQLVANVQADLDNIAKLEQNRNDLQSRLQAMDILEDRIEQLEQFRHDKPIAVSLGLYQGDRLEEHLLTEYYNGVRQIMLAPVADNLAAFLKDVNAHPDQLAPMTRAPESGAVPVSDKTALASRAQGGLYNDASPTNVEDAYNALKTYLMLSDKRHVEQAHLTDQIARFWRGWLETNRGNMPRDEMIRSAERMITFYLSRVQDNDWPMIDANLALIDQTRENLRRVVRGMPARQRVYEEIKARASTRYAPMTVARIVGDENASLVAGSYAIPGTFTRDAWFDYVQPAIRDAATKELQAKDWVLNTASQDDLTLEGSPEQIQKVLVGMYKTEYAQHWQKFMQGIAVQNFGSFGQAVDAMNRLGDPQDSPIRKILETAYEQTSWDNPSLASVTLKKAQTGVVGWVKQWFSRQRGGQLAANIDINGNPVEVPMGPIGQEFIGLARIVQTHDGGQSMLKGYMESLSKVRTRFNVIKNQGDPGPGARQLMQQTLDGNGSELADSLKYVDEQMLTGLTDSQRRSLRPLLVRPLMQAFAVVIQPASVEVNKVWNAQVYQPFQSSLANKYPFSPGAKVEAAASEIAQVFGPDGSIAKFVGTTLGPLAVRRGDTLTARTWGDMGLALTPEFTNGFASWVAPLAGGAATSSASSEPQTVFQILPQPSSGTTEYTIAIDGQQLRYRNTPPQWTNFVWPNPSGSPGATLSATTFDGRTLQLVNEPGRYGLEKLINSAQRTRRPDGTFDLTWTQGGVSVSVTMRIISTSQPSGGGSGGDAPQQQSLRGMHLPSSVANTSASGAINATAQAPAATSGVSPAAAATGAAANASNAQGAQ
Protein structure:
NONE
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Main properties of effector
Molecular weight Sequence length Theoretical pI GRAVY Instability index
141491 1291 8.12 -0.214 39.56
Plant infestation information
Experimental plant:
Susceptible plant: Disease name:
Host classification: NCBI Species:
Pathogen-plant protein interaction
Uniprot ID Protein name Gene name Species Protein sequence
No Record found.