Effector profile
PlantPEAD ID: PlantPEAD40916 Uniprot ID: A0A2J9HKH3 Source: Orthologous
Localization: Cytoplasmic(Pre) Pathogen taxonomy ID: 337 Pathogen type: Bacteria
Species: Burkholderia glumae Strain: Other name: Pseudomonas glumae
Gene name: IcmF NCBI Gene ID: NJFN02000001
Entry name: A0A2J9HKH3_BURGL Protein name: Type VI secretion system membrane subunit TssM
DOI:
Gene/Protein information
Gene sequence:
TTAATCGAACGCCGCCCCGGTGGGCGGCTCCGAGCCGCGTGTGCCCTCTCCAGCGTCATCCGCTTCGCCCGCCGGTGCCGCCGCAGCGGACCGCGGAGCCGAGGTGGCGGCCGCTGTCATCCCGCCGGTCACGCCACCGAAGCCCGGGCAGCGAAACCCCTTCAACAATCCAATCGGCTCCCCTCCGGCCCGGCCGCCAGTGTTCAGTTCGAGCACCGCGTGCCGGCCGTCGAAATCGAAATCCTCGGTGTAGCGCGACGTGTCCGATGTCGGCACCAGACGGCCGCGATCGAACAGGCGGAAGAGCGCCCACGGCCCCTCCGCGCCAAGCGTCGAACTCTGCGCGCTAACCTGCGGCTCTGCCGTGATGCCAGCCATCGAGCCACCGCGCGGTCCCGGCCAGGTGACCGGGAAGGTGGTGACCGGGCCATGCGCGTAACGCAGGCTCTGCCCGTCGATATCGAGACGCAGTTCAGTAATATCGGGATCGAGCGACACCACCCGGATGCCAAGTTTCCAGACCAGCCGGCTCGCGCCCGGACCGAGGAAGAACGCCCTGCGGATCGCGGCGGCGCGCTCGAACGGCTCGAGGCTCGGCCCGCGCATCGGTGGCATCCCGGGAGCGGCCGGCCGATAGCGCCATGGGTGGCTACCCGTATCGACGTGGTCGGCAAGGGTCTCGCGAAAGAACTTGTCGAGCAGGCCCTTCGCGGCGAACACGCGGTTGAAATCGGCGATGCTGACCTCCTGCGCGCTGTCCGCGAACGGATACCGGCCTTCGATCAGGCTGCGACACGGATCGCCCACGTTGGCCTCCAGCCGCGAACCGAGCAGCGCGCCCATCTTGCGATTGACCTCCTGGGTGGAGCGCTCGGCCAAACCAGCCAGTACAGCGCGAAACGGTGCCGGCAACTTTTCGGCCTCGAGCCGCATCGTGGCACCCAGATCGTCGGCGGGTGGCATGGAATCAGTGGCGAGCACGTCACCGGCCAGCACGAGGCGTGTATAGCGCTCGCCGATCAAGCTGACGATGCCGTCGAGCTGCATCGGCCCGCCGCCTCCCGGCGAAGGTAGCGACGGCAGCGACGACAACGAGGCCGATGCCGACCAAGCCCGCACCAACTTGCCGCCATCGGTGTCGGCCTCGCCCGTGACGACGGCACGCAAGGCGGCGAAGCGCTGCTCGACCAGATCGTGCTCCATCCTGCGTCGCGCCAGCCGATTGATCGTCGAGGTGGCGCCGCCGATCGCGAGCACGGCCGAGGCGGCGCGCGAGCGCCGCGACGCGATGGCCGCGGCGCTGCCGGCCAGCGATGGGCCGTCCTGCGTATCGGGCGTCGCGAGCGAGGTCTCGCGAGCGGCCGTGCGTGCCAGTCTGACGAGCGGCGAATCGGGCGCGGAAAGCGTCCGCAGCATCTGCAGGTCGAGCGCCGGTGCAGCGCCGCCGGAAGCGAGCCGCACGCCGTCGAGAAAGCGCTGCCAGTAATTCCCGTAATCGATCAGGTACTGACGGCGGATCTCGTCGGCGAGCGCCCGCTCGCCGGCACGCAGTACACGGCCCGCACGCCCCCATGTCGACGATCGATCGCCCCGCCCCATGAGCCATGCGTCCCGTTCATGCGCCTGCTCGAGAAATTCGGGCAGGCGCCGCGTAAAAACCTCGTGATAGCCCTCGTAGGTATAGAGCCCCGGCACTCCCTGCGCGAGGGCCGGGTCGCCGGCCATCGCGAACACCGACAGCGCCTGCGGGCCGCCCGCGCGGGCCAGCGTGATGTTCTCGGGTGCATCGGGCTCCATCGCCTTCATTGCGCGCTCGTAGAGCCGCCCCGAGGCCGAATTGCGGCCTAGCAGCTCGCGCGCACGCTTGATCAGCGCGCCGTCCATCGGCGTGGCGGGCGTCACGGGCACACCGTCGCGAAACAGCGCGTCGAGATGGCCCGCCACCACATCGCGATCGCCCAGCATCGCGACGCTGCCCGCCTGCTCCCAGTCTCGCATCACCCAGGCCTTGACCTCCTTCGCATCGTAGTGCGAAGGATCGTAGAGCATGAGATAGACCGGCAGGGTTTTGTAGACCTCGTCGGCGTTCTGCGCGCGCACCTCGCCGTCGAGCACCGTCGCAATACGGGCAACGACGGGCGGCAGCAGCATCTGGTCGAGCAGCGCCGCATAGGTTCGGCTCGAAGCATCGACCACGCCGGGGGCCGCGTACAGCCCGTAGCGCCACGCGATGCCGGGGCGATCAAGGTCGAGCTCACCGAACCGAGGCAAATCGAGCGACGCCGACAGCAGTGCGCCCGTGTCACCCGGCTTCGGCGTCCGGCGCTGTGCCTGCACGCGCGCGGCGAGCGCATTCGTCTGGTGGTCGATCGCAGCGAGATAGTCGCGATTGCGCTGGAAACTGCCGGCCATCCCATACACGAGCCAAGCCGCTACCGCGATTGACAGCAGATGGCCGACCACCCGCAACGCGCGAAAGCGGATTTCCCAGCGCAGATTCGGGCGCACCAGATGCCCTTCGGCAACGATCACGCGTTGGAACAGGTTGCGCAAGAAATAGCCGCGATACTCGACGGGCGCGGCGCCGTCCGGCGCCGGTGCGGAGACCGCTGCGGCATCCGCGCCGAAGCGGGCCGCCAGCCCTCGCCGCAGACGTTGCAGCAGCGTGTCGCGATCGGCAGGCACCACGTCGTGAGTCTGCGCCGCACTACTGAAATATACGCCGCGCAGCACGCCGTTCAGCTCGGTATCGTCGTATTTCGAATCGACGAACACGGACGCGACGAATTCGACCAGTATCGCGCATAGGCTGCGAAATTCCGCCGGCAACGCATAAAGCCTTCGACGCCGATCGAGCTCGTATTCCTCCTGCAGCCGCGCGTTGAGGCCGTCTTCGAAACCTTGTTCCAGTTCACGCAGCTCCTCGATACAGGCCAGACGCAACGCGTCGCGCCGCTCCTCGGGCGCGTCGCGATGATAGGGCAGCGTAAACCCGAGAATCTGCGCGCGACTCTCCGCCGTCAACGACTGGAAATACTCGAGAAAGCCCGGCAGCAGGTCGAGCTTCGTGACCACCAGATAGGCAGGGTAGCGAATCCGCAGATCGTGCTTCAGCTCGCCGAGCCGCGCGCGCATCGCCGCGGCGAGCAGCTTGAGCTCGGACGGCGAGCACGTCAGCAGTTCCTCGACCGAGACCACCAGCAGCACGCCATTGACCGGCGCGCGGGGCCGGCGCTTGCGCAGCAGAGCGAGGAAGCCGCGCCATTCGGCGGCATTCGCCGATCCCACCGCGCCGGCGGCGTGGTCGGGCTCATCGGCTCGTGCCGGCATGTCATGCATCAGGTAACGGCCCGCCGTGTCGATCAGGATCGCGTCGTTGCCAAACCACCAATCGCAATTCACCGTTTCGGCGTGGTGGCCGAGCGAGGCCGCCACCATCTGATCGGCATCGGGAAACTCGAGGCCGGAATTCAGGATCATCGTGGTCTTGCCCGCGCCCGGCGAACCCATCACCAGATACCATGGCAACGCGTACAGATAGCGCTGGCTTTCGAGCAGCCGGCGCAGGCCGAACGCCCCACCGCGCAGTTGCTTGACCTTGTCGATGGCCTTCGTCACCACCGAGTTGACAGCGCGGATTTGCTCGCGCGCCGGCGCGTCGTCACTAGCCTGGGTGGAGAACGGGTTCAGGATGCGCTGCAGCAGCGCGTCGTTGCTGCGCATTGCCTTCCAGAGCCGGTACAGGCCGTAGGCCGCGTAACAGGCCACCAGCACCGCGATCAGCAGCACGCGCACGCCCGTCGACGCCAGCGGCCGCACGGAGCCGAACATGAACAGCGGCCCGAGATACCAGATCGCGAGGCAAAGCAGCGCGGCCCCGATCACGCCGAGCGACCAACCGAGCAAACAGAACAGCAACATCGCTAGCAGCGTGACGATCGACAGCGCGCGCGCCAGCACCGTCGCGAGAGGACGATAGTCGCCGAACGCGATAAGCGGGCCGATGAACCAGATGGCCGCGGCGACCGCCACGATCGCCACGAACACGAGCGTTTGACGCGAGATGAGGAATTTGAAGAAGCGGTTCAGATGGGACAT
Protein sequence:
MSHLNRFFKFLISRQTLVFVAIVAVAAAIWFIGPLIAFGDYRPLATVLARALSIVTLLAMLLFCLLGWSLGVIGAALLCLAIWYLGPLFMFGSVRPLASTGVRVLLIAVLVACYAAYGLYRLWKAMRSNDALLQRILNPFSTQASDDAPAREQIRAVNSVVTKAIDKVKQLRGGAFGLRRLLESQRYLYALPWYLVMGSPGAGKTTMILNSGLEFPDADQMVAASLGHHAETVNCDWWFGNDAILIDTAGRYLMHDMPARADEPDHAAGAVGSANAAEWRGFLALLRKRRPRAPVNGVLLVVSVEELLTCSPSELKLLAAAMRARLGELKHDLRIRYPAYLVVTKLDLLPGFLEYFQSLTAESRAQILGFTLPYHRDAPEERRDALRLACIEELRELEQGFEDGLNARLQEEYELDRRRRLYALPAEFRSLCAILVEFVASVFVDSKYDDTELNGVLRGVYFSSAAQTHDVVPADRDTLLQRLRRGLAARFGADAAAVSAPAPDGAAPVEYRGYFLRNLFQRVIVAEGHLVRPNLRWEIRFRALRVVGHLLSIAVAAWLVYGMAGSFQRNRDYLAAIDHQTNALAARVQAQRRTPKPGDTGALLSASLDLPRFGELDLDRPGIAWRYGLYAAPGVVDASSRTYAALLDQMLLPPVVARIATVLDGEVRAQNADEVYKTLPVYLMLYDPSHYDAKEVKAWVMRDWEQAGSVAMLGDRDVVAGHLDALFRDGVPVTPATPMDGALIKRARELLGRNSASGRLYERAMKAMEPDAPENITLARAGGPQALSVFAMAGDPALAQGVPGLYTYEGYHEVFTRRLPEFLEQAHERDAWLMGRGDRSSTWGRAGRVLRAGERALADEIRRQYLIDYGNYWQRFLDGVRLASGGAAPALDLQMLRTLSAPDSPLVRLARTAARETSLATPDTQDGPSLAGSAAAIASRRSRAASAVLAIGGATSTINRLARRRMEHDLVEQRFAALRAVVTGEADTDGGKLVRAWSASASLSSLPSLPSPGGGGPMQLDGIVSLIGERYTRLVLAGDVLATDSMPPADDLGATMRLEAEKLPAPFRAVLAGLAERSTQEVNRKMGALLGSRLEANVGDPCRSLIEGRYPFADSAQEVSIADFNRVFAAKGLLDKFFRETLADHVDTGSHPWRYRPAAPGMPPMRGPSLEPFERAAAIRRAFFLGPGASRLVWKLGIRVVSLDPDITELRLDIDGQSLRYAHGPVTTFPVTWPGPRGGSMAGITAEPQVSAQSSTLGAEGPWALFRLFDRGRLVPTSDTSRYTEDFDFDGRHAVLELNTGGRAGGEPIGLLKGFRCPGFGGVTGGMTAAATSAPRSAAAAPAGEADDAGEGTRGSEPPTGAAFD
Protein structure:
NONE
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Main properties of effector
Molecular weight Sequence length Theoretical pI GRAVY Instability index
148293 1365 8.36 -0.028 40.27
Plant infestation information
Experimental plant:
Susceptible plant: Disease name:
Host classification: NCBI Species:
Pathogen-plant protein interaction
Uniprot ID Protein name Gene name Species Protein sequence
No Record found.