Effector profile
PlantPEAD ID: PlantPEAD40919 Uniprot ID: C5ALD5 Source: Orthologous
Localization: Cytoplasmic(Pre) Pathogen taxonomy ID: 337 Pathogen type: Bacteria
Species: Burkholderia glumae Strain: strain BGR1 Other name: Pseudomonas glumae
Gene name: NCBI Gene ID: CP001504
Entry name: C5ALD5_BURGB Protein name: Type VI secretion protein IcmF
DOI:
Gene/Protein information
Gene sequence:
ATGTCCCATCTGAACCGCTTCTTCAAATTCCTCATCTCGCGTCAAACGCTCGTGTTCGTGGCGATCGTGGCGGTCGCCGCGGCCATCTGGTTCATCGGCCCGCTTATCGCGTTCGGCGACTATCGTCCTCTCGCGACGGTGCTGGCGCGCGCGCTGTCGATCGTCACGCTGCTAGCGATGTTGCTGTTCTGTTTGCTCGGTTGGTCGCTCGGCGTGATCGGGGCCGCGCTGCTTTGCCTCGCGATCTGGTATCTCGGGCCGCTGTTCATGTTCGGCTCCGTGCGGCCGCTGGCGTCGACGGGCGTGCGCGTGCTGCTGATCGCGGTGCTGGTGGCCTGTTACGCGGCCTACGGCCTGTACCGGCTCTGGAAGGCAATGCGCAGCAACGACGCGCTGCTGCAGCGCATCCTGAACCCGTTCTCCACCCAGGCTAGTGACGACGCGCCGGCGCGCGAGCAAATCCGCGCTGTCAACTCGGTGGTGACGAAGGCCATCGACAAGGTCAAGCAACTGCGCGGTGGGGCGTTCGGCCTGCGCCGGCTGCTCGAAAGCCAGCGCTATCTGTACGCGTTGCCATGGTATCTGGTGATGGGTTCGCCGGGCGCGGGCAAGACCACGATGATCCTGAATTCCGGCCTCGAGTTTCCCGATGCCGATCAGATGGTGGCGGCCTCGCTCGGCCACCACGCCGAAACGGTGAATTGCGATTGGTGGTTTGGCAACGACGCGATCCTGATCGACACGGCGGGCCGTTACCTGATGCATGACATGCCGGCACGAGCCGATGAGCCCGACCACGCCGCCGGCGCGGTGGGATCGGCGAATGCCGCCGAATGGCGCGGCTTCCTCGCTCTGCTGCGCAAGCGCCGGCCCCGCGCGCCGGTCAATGGCGTGCTGCTGGTGGTCTCGGTCGAGGAACTGCTGACGTGCTCGCCGTCCGAGCTCAAGCTGCTCGCCGCGGCGATGCGCGCGCGGCTCGGCGAGCTGAAGCACGATCTGCGGATTCGCTACCCTGCCTATCTGGTGGTCACGAAGCTCGACCTGCTGCCGGGCTTTCTCGAGTATTTCCAGTCGTTGACGGCGGAGAGTCGCGCGCAGATTCTCGGGTTTACGCTGCCCTATCATCGCGACGCGCCCGAGGAGCGGCGCGACGCGTTGCGTCTGGCCTGTATCGAGGAGCTGCGTGAACTGGAACAAGGTTTCGAAGACGGCCTCAACGCGCGGCTGCAGGAGGAATACGAGCTCGATCGGCGTCGAAGGCTTTATGCGTTGCCGGCGGAATTTCGCAGCCTATGCGCGATACTGGTCGAATTCGTCGCGTCCGTGTTCGTCGATTCGAAATACGACGATACCGAGCTGAACGGCGTGCTGCGCGGCGTATATTTCAGTAGTGCGGCGCAGACTCACGACGTGGTGCCTGCCGATCGCGACACGCTGCTGCAACGTCTGCGGCGAGGGCTGGCGGCCCGCTTCGGCGCGGATGCCGCAGCGGTCTCCGCACCGGCGCCGGACGGCGCCGCGCCCGTCGAGTATCGCGGCTATTTCTTGCGCAACCTGTTCCAACGCGTGATCGTTGCCGAAGGGCATCTGGTGCGCCCGAATCTGCGCTGGGAAATCCGCTTTCGCGCGTTGCGGGTGGTCGGCCATCTGCTGTCAATCGCGGTAGCGGCTTGGCTCGTGTATGGGATGGCCGGCAGTTTCCAGCGCAATCGCGACTATCTCGCTGCGATCGACCACCAGACGAATGCGCTCGCCGCGCGCGTGCAGGCACAGCGCCGGACGCCGAAGCCGGGTGACACGGGCGCACTGCTGTCGGCGTCGCTCGATTTGCCTCGGTTCGGTGAGCTCGACCTTGATCGCCCCGGCATCGCGTGGCGCTACGGGCTGTACGCGGCCCCCGGCGTGGTCGATGCTTCGAGCCGAACCTATGCGGCGCTGCTCGACCAGATGCTGCTGCCGCCCGTCGTTGCCCGTATTGCGACGGTGCTCGACGGCGAGGTGCGCGCGCAGAACGCCGACGAGGTCTACAAAACCCTGCCGGTCTATCTCATGCTCTACGATCCTTCGCACTACGATGCGAAGGAGGTCAAGGCCTGGGTGATGCGAGACTGGGAGCAGGCGGGCAGCGTCGCGATGCTGGGCGATCGCGATGTGGTGGCGGGCCATCTCGACGCGCTGTTTCGCGACGGTGTGCCCGTGACGCCCGCCACGCCGATGGACGGCGCGCTGATCAAGCGTGCGCGCGAGCTGCTAGGCCGCAATTCGGCCTCGGGGCGGCTCTACGAGCGCGCAATGAAGGCGATGGAGCCCGATGCACCCGAGAACATCACGCTGGCCCGCGCGGGCGGCCCGCAGGCGCTGTCGGTGTTCGCGATGGCCGGCGACCCGGCCCTCGCGCAGGGAGTGCCGGGGCTCTATACCTACGAGGGCTATCACGAGGTTTTTACGCGGCGCCTGCCCGAATTTCTCGAGCAGGCGCATGAACGGGACGCATGGCTCATGGGGCGGGGCGATCGATCGTCGACATGGGGGCGTGCGGGCCGTGTACTGCGTGCCGGCGAGCGGGCGCTCGCCGACGAGATCCGCCGTCAGTACCTGATCGATTACGGGAATTACTGGCAGCGCTTTCTCGACGGCGTGCGGCTCGCTTCCGGCGGCGCTGCACCGGCGCTCGACCTGCAGATGCTGCGGACGCTTTCCGCGCCCGATTCGCCGCTCGTCAGACTGGCACGCACGGCCGCTCGCGAGACCTCGCTCGCGACGCCCGATACGCAGGACGGCCCATCGCTGGCCGGCAGCGCCGCGGCCATCGCGTCGCGGCGCTCGCGCGCCGCCTCGGCCGTGCTCGCGATCGGCGGCGCCACCTCGACGATCAATCGGCTGGCGCGACGCAGGATGGAGCACGATCTGGTCGAGCAGCGCTTCGCCGCCTTGCGTGCCGTCGTCACGGGCGAGGCCGACACCGATGGCGGCAAGTTGGTGCGGGCTTGGTCGGCATCGGCCTCGTTGTCGTCGCTGCCGTCGCTACCTTCGCCGGGAGGCGGCGGGCCGATGCAGCTCGACGGCATCGTCAGCTTGATCGGCGAGCGCTATACACGCCTCGTGCTGGCCGGTGACGTGCTCGCCACTGATTCCATGCCACCCGCCGACGATCTGGGTGCCACGATGCGGCTCGAGGCCGAAAAGTTGCCGGCACCGTTTCGCGCTGTACTGGCTGGTTTGGCCGAGCGCTCCACCCAGGAGGTCAATCGCAAGATGGGCGCGCTGCTCGGTTCGCGGCTGGAGGCCAACGTGGGCGATCCGTGTCGCAGCCTGATCGAAGGCCGGTATTCGTTCGCGGACAGCGCGCAGGAGGTCAGCATCGCCGATTTCAACCGCGTGTTCGCCGCGAAGGGCCTGCTCGACAAGTTCTTTCGCGAGACCCTTGCCGACCACGTCGATACGGGTAGCCACCCATGGCGCTATCGGCCGGCCGCTCCCGGGATGCCACCGATGCGCGGGCCGAGCCTCGAGCCGTTCGAGCGCGCCGCCGCGATCCGCAGGGCGTTCTTCCTCGGTCCGGGCGCGAGCCGGCTGGTCTGGAAACTTGGCATCCGGGTGGTGTCGCTCGATCCCGATATTACTGAACTGCGTCTCGATATCGACGGGCAGAGCCTGCGTTACGCGCATGGCCCGGTCACCACCTTCCCGGTCACCTGGCCGGGACCGCGCGGTGGCTCGATGGCTGGCATCACGGCAGAGCCGCAGGTTAGCGCGCAGAGTTCGACGCTTGGCGCGGAGGGGCCGTGGGCGCTCTTCCGCCTGTTCGATCGCGGCCGTCTGGTGCCGACATCGGACACGTCGCGCTACACCGAGGATTTCGATTTCGACGGCCGGCACGCGGTGCTCGAACTGAACACTGGCGGCCGGGCCGGAGGGGAGCCGATTGGATTGTTGAAGGGGTTTCGCTGCCCGGGCTTCGGTGGCGTGACCGGCGGGATGACAGCGGCCGCCACCTCGGCTCCGCGGTCCGCTGCGGCGGCACCGGCGGGCGAAGCGGATGACGCTGGAGAGGGCACACGCGGCTCGGAGCCGCCCACCGAGGCGGCGTTCGATTAA
Protein sequence:
MSHLNRFFKFLISRQTLVFVAIVAVAAAIWFIGPLIAFGDYRPLATVLARALSIVTLLAMLLFCLLGWSLGVIGAALLCLAIWYLGPLFMFGSVRPLASTGVRVLLIAVLVACYAAYGLYRLWKAMRSNDALLQRILNPFSTQASDDAPAREQIRAVNSVVTKAIDKVKQLRGGAFGLRRLLESQRYLYALPWYLVMGSPGAGKTTMILNSGLEFPDADQMVAASLGHHAETVNCDWWFGNDAILIDTAGRYLMHDMPARADEPDHAAGAVGSANAAEWRGFLALLRKRRPRAPVNGVLLVVSVEELLTCSPSELKLLAAAMRARLGELKHDLRIRYPAYLVVTKLDLLPGFLEYFQSLTAESRAQILGFTLPYHRDAPEERRDALRLACIEELRELEQGFEDGLNARLQEEYELDRRRRLYALPAEFRSLCAILVEFVASVFVDSKYDDTELNGVLRGVYFSSAAQTHDVVPADRDTLLQRLRRGLAARFGADAAAVSAPAPDGAAPVEYRGYFLRNLFQRVIVAEGHLVRPNLRWEIRFRALRVVGHLLSIAVAAWLVYGMAGSFQRNRDYLAAIDHQTNALAARVQAQRRTPKPGDTGALLSASLDLPRFGELDLDRPGIAWRYGLYAAPGVVDASSRTYAALLDQMLLPPVVARIATVLDGEVRAQNADEVYKTLPVYLMLYDPSHYDAKEVKAWVMRDWEQAGSVAMLGDRDVVAGHLDALFRDGVPVTPATPMDGALIKRARELLGRNSASGRLYERAMKAMEPDAPENITLARAGGPQALSVFAMAGDPALAQGVPGLYTYEGYHEVFTRRLPEFLEQAHERDAWLMGRGDRSSTWGRAGRVLRAGERALADEIRRQYLIDYGNYWQRFLDGVRLASGGAAPALDLQMLRTLSAPDSPLVRLARTAARETSLATPDTQDGPSLAGSAAAIASRRSRAASAVLAIGGATSTINRLARRRMEHDLVEQRFAALRAVVTGEADTDGGKLVRAWSASASLSSLPSLPSPGGGGPMQLDGIVSLIGERYTRLVLAGDVLATDSMPPADDLGATMRLEAEKLPAPFRAVLAGLAERSTQEVNRKMGALLGSRLEANVGDPCRSLIEGRYSFADSAQEVSIADFNRVFAAKGLLDKFFRETLADHVDTGSHPWRYRPAAPGMPPMRGPSLEPFERAAAIRRAFFLGPGASRLVWKLGIRVVSLDPDITELRLDIDGQSLRYAHGPVTTFPVTWPGPRGGSMAGITAEPQVSAQSSTLGAEGPWALFRLFDRGRLVPTSDTSRYTEDFDFDGRHAVLELNTGGRAGGEPIGLLKGFRCPGFGGVTGGMTAAATSAPRSAAAAPAGEADDAGEGTRGSEPPTEAAFD
Protein structure:
NONE
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Main properties of effector
Molecular weight Sequence length Theoretical pI GRAVY Instability index
148355 1365 8.19 -0.03 40.31
Plant infestation information
Experimental plant:
Susceptible plant: Disease name:
Host classification: NCBI Species:
Pathogen-plant protein interaction
Uniprot ID Protein name Gene name Species Protein sequence
No Record found.