Effector profile
PlantPEAD ID: PlantPEAD40920 Uniprot ID: C5AMV3 Source: Orthologous
Localization: Cytoplasmic(Pre) Pathogen taxonomy ID: 337 Pathogen type: Bacteria
Species: Burkholderia glumae Strain: strain BGR1 Other name: Pseudomonas glumae
Gene name: NCBI Gene ID: CP001504
Entry name: C5AMV3_BURGB Protein name: Type VI secretion protein IcmF
DOI:
Gene/Protein information
Gene sequence:
TCATGGTCGTGGCGTCAAGGGAGGAACCGAGATCGGGAATACCGCCGGCAATTTCAGCGGCGTCGGGGTTTTCGCGTTGACGTTCGACAGCCGGATACCGAGGAATACGTGTGCGGTATCGGTGGCCGGGCTGCCGGCGCGGCTCGAATCGAGCACCGGCACGTCGAACTGCAGCAGCGAGCGCGTGGCGTCGCGCGGATCGGTGGCCGGATCCGCGCTGGGCCGATGGCGCTCCATCATACGCAGCAGCGCCCAGTTGCCGGCGGCCGCGAACGACGCGGTGTTGCCGTCCACCTGCAGATCGGGCGCGCCGACGGCCAGCGACGGCCGCCACGGCGAGAGGCCGGCCCACGACAGGTCGAGCACCAGCGGCTGCCCGAACTGCCAGTCCAGGGTGCTGCCGCCGTTCGGGAACGAGGCGCCCTTGGCGCCCGACACCAGGTTCATCTCGATGATCTGGTTGCTGCCGTTCGCGCCGGGCTTGAGGGCGCGGAAGTTGACGTTCAGGCTCAGCAGCGGATCGGCGGCGGGGTCGCCCGGCGCCGTGCCCGGCACCACGTTGCCCTGCAGGAACGCGTCCACCTGATCGAGCTGCGCGAGGAACTGCCGCACGCTCTTCCAGTACGGATCGTTGATGCCCGCCACCTGCTTCTGCAGTGCGGCGCGCCGGCCCTCGTAGTCGGTGAAGAAGCCCTTCACGGCGTCGAGGCTGGCGTCGTCGGCGTCGAGCGTGCCGAACGGATAGCGGCCCGCCAGGTCGCGCGTGAAGCGGCTCGCCACCGGCTGGAACGCGTTCTGCGCCTGCGCGTAACGCTCGCCCTTGCAGTGCATCTGCACGCCCTGCATGAGCTGGCCGCGGTAGTTCGAGAACAGATCGTTGCCGAGCGCGGGCGACGAGTACGCGGCCAGCTGCTCGCCGCAGTTGTCGTTCTGCAGCGCCGGCAGCAGCTTCAGGAACAGGTTGTCGAGCACGGCCGGCTGCGAGTTCGGGTCCTTGCCCTGCGTGTAGCGCCTGAGTTCGCTGGCGGTGTTGTTCCAGTAGGCCGCGTTGGCGGTGTTGGCGCTCGCGTTCGAGGCCGACGGCCCGGCCTGCCCGAGATAGGTCAGGAACGGCTGGGCGTAGCCGACCAGCACCTGCACGCGGCTGACCTGGCGCGCCAGCATGTCGGTCACCACCGGCGTGCTGCCGAGATCGAAGAAGTAGGCGTCCGGGGCCGGCGAGGCGGGCAGGTAGGCCGGCTGATACAGCTGGCTCTGGTCGGCCAGCAGCGAGATGCGGCCGAGCTGGCTGTTGGCGTACTGGTGCGCGCACTGCGTGAGCTGCGTGGCGCTGCCGTCCATGCCCAGCGCGCGGAACTGCTGCTCCACGTTCAGCACCAGCGGCGCGACGGCCGCGAAATTGCCGCTGTCGGCGCTCTGCTGCGCCTCGGTGCTGGTGTCGGTGCCGCTCGCGGCGTAGCCGGCCGCGGCCTGCGCCTGCGCGAGCTGGTTGTTCATCGCCAGTTCGAGCTGGTAGCGCGCGAGCTGGCGATAGAGCGCGTCGGGCTGGCCGCCCTTGAGCATCGGCTGGGCCAGGAACTTCCGGTAGTCGGCCGGGTACTGGGCGGCGTCCTTGAGCAGGCCCTGGCTCCAGTTGGCGAGCTTGCCCGTGCAGCTGAAGCTGGCGAGCGGATCGATCGACATGTAGCCGAGGCTGCCGAGCGCGTCGAGGCCGGTCAGCTCGCCCTGCATCGCCGGGTTCAGCGTGATCTGGCCGTTGACGTTGACGAACAGCGCGCCGTAGCCGGGCAGCGTCAGCGCGTTCAGCGTCTGCATCGCGAGCGGATACTGATGCGCGGCGTCGAATTGCGCGCTGACCTGGGCCTGGATGTAGGACGGATAGCCGAAGTCGGCGACCAGCGGCTGCAGGCTCGCGAGCAGCTGGTTCTGCACCGTCAGGATCGGGTTGGCGGCGGCGCTGGAGCCGAGCCACGCGGTGCGGATCCAGTTCAGCCAGTGCGTGAACTGCCTGACGTGCGCGAGGATCGGCTGCTGCCTGGCCTGCAGCTGTTCGAGCAGCGGCAGGCCCGATTGCAGTTCGGCCTGCAGCAGGCTGCCCGCCTGCGCGGCCAGCGCGACGATGTGATTGCCGACGCTCTGCCTGAGCTGCGGCGGGGTGGCGATCTCGCCGCTGAAATCGCGCTCGGTGAGATCGCCGAGGGTGACGGGCAGCAGGCCGGCATGCGCGCGCAGATACGGCGGCACCGGCGTGCGGTAGGCGTATTCGACCAGATCGAAGAAGCCGGGCAACGGCACGCGCTCGCGCGCGTAGGGGGTCTTGCCCAGCAGGCGCTGGAAGCGCGCCGCGTTGCGCTCGTACTGGTCGGCCTGCTGCACGAAGCCTTGGAGCTGGTCGAGCGCCTGGGTGTAGCCGAGCCCGGCGGAGATGCCGCGATTGGCCTCGTTGCCGAGCGCGTAGGCGCGTTGCGACAGCTGGCACGCGAGCCCCGGCAGGATCACCTTGCGCAACGCGGTGTCGATCACGCGCCGCGCGCTCTGGTGGCTCAGCCGCGAATCGAACAGCGACGCCGGCAGCAGCCAGCTGCTGGCGTCGGCGTCGATCTGCGCGACCTGCTCGATCAGCTGATAGACGGGCGCCTGCGCGATGCAGCCGGCGCCGGGCGCGGGTGCCTGCAGCTGCTGCATGCGCTCGAGCGCCTGGATCACCCGGCCGATCTGCGCGTCGATCATCCACACCCGCACGGCGAACGCCAGCAGCAGCAGCGAGAAGCCGATCACGCAGGCCCACTGCACGCGGCGGATCAGCAGGTTGCGCGACCACACGCCGGCGCGCGTCGGGCGCGCCAGATGCTTCTCCGCGAGCACCTTCTCGAGCATCAGGTCGCGCACGAACGCCACGTCGCGGCGCGGGCCGTCGCGCGCTTCGAGCGGCTCGCCGGGCTCGGCGACGAGGCCGGTGAAATAGACGCCGCGCAGGAAGAAGGTGGTCTCCCAGGCCGATACCTGGAACACCACCGACAGCCACTGCTCGAACGGCCCCTGCAACTGCGCGAAGCGCAGCGGGTAGAGGAACATCGGGTCGGCGTCGTCGGCGGCGATCCGCTCGCAGTGCGCGGCGGTCTCCACCTGCAGCGCGCGCAGCTGGGCGCCGATCGCCGCGAAGATCTGCGCGCCCCACTGGGTGGGCGGCGTGTCGAAGGTCTGGCTCGGCGCCGACCAGCCCACCATCTCGGTGTGCCGCTGCGGCGCCTGCGAGCGCCAGAACGCGCCGAAGCCCTCGACGTGATCGCAGGCGGTGACCACGACATAGACGGGCAGTGCGAATTCGAGCCGGTCCTCGATGGTGCGCAGCTGCTGGCGCGCGTTCTGCGCGGCGGCCATCAGGCGGGCCGGGTCGCGCTGCAGGAAGGTGGTGGCGCACACCACCAGCACGATGCCGTCGAGCGCGCGCTCGGGGCGCAGCGCGTCGAGCTGGTCGAGGAACTTCAGCCAGCGGCGCGCATCGGCGCCGTCCGCCGTGCCGCTGTCGAGCATCGCGCTGGCGGCCGCCTCGGGCCACTTGCCGAGCGGATCGAGCACCAGGCTCTGGTCGATCGCGTGCCAGCTCGCGCCTTCCAGCGCGAGGCTCTGCTGCCGCTCGCCGAGCGGCTGCGTGTGCTGCGGGCCGACCGATTCGAGCAGGCTGGTCTTGCCGGCCCCGGCCTGGCCGAGCACCAGCAGCCAGGGCGTCGCGTAGCGCCACTCGCGCCCGGTGCGCAAATAGTCGAGGGCAAGCGAGGCGCGTTCGATCCAGCCCTTCGCGCGGGTCTCGGCGGCGGGCTCGCAGCCGCACAGCGGCGGCACGGCCGGCGCCTTCAGGAGCGGCCCGAGCCTGGCCCACAGCTTGCCGGCCAGCTTCGCCAGCACGGCCAGCGCGAGCAGGGCGGCCAGCACGCCCAGCACCAGCTTCAGCGTGCCGGCAGCGGGTGCCCAGCCGGTCTGCGCCTTCAGCCAGGCGGTCGATTTCAGTATTGCGTCCAC
Protein sequence:
MDAILKSTAWLKAQTGWAPAAGTLKLVLGVLAALLALAVLAKLAGKLWARLGPLLKAPAVPPLCGCEPAAETRAKGWIERASLALDYLRTGREWRYATPWLLVLGQAGAGKTSLLESVGPQHTQPLGERQQSLALEGASWHAIDQSLVLDPLGKWPEAAASAMLDSGTADGADARRWLKFLDQLDALRPERALDGIVLVVCATTFLQRDPARLMAAAQNARQQLRTIEDRLEFALPVYVVVTACDHVEGFGAFWRSQAPQRHTEMVGWSAPSQTFDTPPTQWGAQIFAAIGAQLRALQVETAAHCERIAADDADPMFLYPLRFAQLQGPFEQWLSVVFQVSAWETTFFLRGVYFTGLVAEPGEPLEARDGPRRDVAFVRDLMLEKVLAEKHLARPTRAGVWSRNLLIRRVQWACVIGFSLLLLAFAVRVWMIDAQIGRVIQALERMQQLQAPAPGAGCIAQAPVYQLIEQVAQIDADASSWLLPASLFDSRLSHQSARRVIDTALRKVILPGLACQLSQRAYALGNEANRGISAGLGYTQALDQLQGFVQQADQYERNAARFQRLLGKTPYARERVPLPGFFDLVEYAYRTPVPPYLRAHAGLLPVTLGDLTERDFSGEIATPPQLRQSVGNHIVALAAQAGSLLQAELQSGLPLLEQLQARQQPILAHVRQFTHWLNWIRTAWLGSSAAANPILTVQNQLLASLQPLVADFGYPSYIQAQVSAQFDAAHQYPLAMQTLNALTLPGYGALFVNVNGQITLNPAMQGELTGLDALGSLGYMSIDPLASFSCTGKLANWSQGLLKDAAQYPADYRKFLAQPMLKGGQPDALYRQLARYQLELAMNNQLAQAQAAAGYAASGTDTSTEAQQSADSGNFAAVAPLVLNVEQQFRALGMDGSATQLTQCAHQYANSQLGRISLLADQSQLYQPAYLPASPAPDAYFFDLGSTPVVTDMLARQVSRVQVLVGYAQPFLTYLGQAGPSASNASANTANAAYWNNTASELRRYTQGKDPNSQPAVLDNLFLKLLPALQNDNCGEQLAAYSSPALGNDLFSNYRGQLMQGVQMHCKGERYAQAQNAFQPVASRFTRDLAGRYPFGTLDADDASLDAVKGFFTDYEGRRAALQKQVAGINDPYWKSVRQFLAQLDQVDAFLQGNVVPGTAPGDPAADPLLSLNVNFRALKPGANGSNQIIEMNLVSGAKGASFPNGGSTLDWQFGQPLVLDLSWAGLSPWRPSLAVGAPDLQVDGNTASFAAAGNWALLRMMERHRPSADPATDPRDATRSLLQFDVPVLDSSRAGSPATDTAHVFLGIRLSNVNAKTPTPLKLPAVFPISVPPLTPRP
Protein structure:
NONE
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Main properties of effector
Molecular weight Sequence length Theoretical pI GRAVY Instability index
145082 1339 6.5 -0.063 38.58
Plant infestation information
Experimental plant:
Susceptible plant: Disease name:
Host classification: NCBI Species:
Pathogen-plant protein interaction
Uniprot ID Protein name Gene name Species Protein sequence
No Record found.