Effector profile
PlantPEAD ID: PlantPEAD40925 Uniprot ID: A0A250JH53 Source: Orthologous
Localization: Cytoplasmic(Pre) Pathogen taxonomy ID: 43 Pathogen type: Bacteria
Species: Cystobacter fuscus Strain: Other name:
Gene name: NCBI Gene ID: CP022098
Entry name: A0A250JH53_9BACT Protein name: Type VI secretion system component TssM1 N-terminal domain-containing protein
DOI:
Gene/Protein information
Gene sequence:
CTAGGGGCTCGGGGAGGAAAGTGGGGGCGGAGGGGCGTCATCGAAGGAGGAGTCGCCCGCCCGGGTGGATGGGGGCGGAGGGGCGTCATCGAAGGGGGAGTCGCCCGCCCGGGTGGATGGGGGCGGAGGGGCGTCATCGAAGGGGGAGTCGCCCGCCCGGGTGGGTCGGGGCGGAGGGGCGTCATCGAAGACAGTGGACTGGGCCGGCCTGGGTGCCGGGCGGCGCCGGGCGGGAGCCTCCTTCCTCGGCGGGGGTGCCTCGGGGGGCGGTTCCACCACCGGTTCCACCACCGCCACCGGAGGCGGAGCGGGAGGTTGCTCGCGGCCTCGCACTCCCTTCCACAGCACGCCCAGGAAGAGCACCGCGAGCAGCACGCTGACGGCGAGCGCGCCCTGGAGCAGGCCGACGCCCCTCCGGTTGATGCGCGCGGCCTCCGCGTCCGGGCTGGCCAGTCCGCTCTCGGGGAAGGCCTTGCGCTCCAGCAGGTGGGTGATGAAGGCCAGCGAGCGCGGACTTCCTCCGGGACCCGTGGCGCCTTCCGCCTCGGGGTCCCCGCAGAAGTAGAGGCCACGCAGCAGCGCGGGCTGGGTGAAGGCGGAGGACTGGAAGAGGACATCGAGCAACCGTCGCACCGGCCCGGCCAACGCGCGCAGCTCGGACGGGAAGAGGAAGGAGGTCTCCCGGTCCGGCTGCGTGCCGTGTCCGTCCGCGAGCAACTCGAGTTGGAGTCCACACAGCTCCCGGTGGATGACCTGGAAGGCCTCGTCCACCCAGGCGGAGGTGTAGGGCTCCTGGGGGGAGTACGGGCTGGACCATCCGAGCATCTCGTCCCGCCTGCGTGGCGGCAGCGACCGGCAGAAGGCGGTGAAGCCGGGGATGACGTCCGAGCGGGTGATGACGATGAAGACGGGTACGCGCACCCCCAGCTCACGGCGCAGGGCCTGAAGTCCCTGGAAGAGGCCCTGGGCCATGCGCTCCAACCCGACGTCATCCAAGGCCTTGGGCCCGGTGAGGTGCGTGGCGGACACGGTCAGCATCAGCCCGTCGATGGGCCGCTGGCCGCGGACGCGTTTCAGGCGCTGGAGGACGGCCCGCCACTCCTCCGTGGGCTGTTCTGTCATGCCGGGCATGTCGAGCACGACGCCCTGATCGAAGAGCCAGACCCCCCAACCGCCCGCCTCCATCTCCCCGCGGGTGGGCGAGCCGTAGGGTCGGCGAAGGTTGGCACCCGCGGCCAGCGAGGTGCGTCCCGAGCCGGGCTCTCCCACCATCATCAACCAGGGTACCTGGTAGCGCCGCTCCCGGTGCCGCCCGGTGGCGCCCAGCCGGTGAAGTGCCGTGTGGAGGGTCGAGGAAGGGTCGCTCAT
Protein sequence:
MSDPSSTLHTALHRLGATGRHRERRYQVPWLMMVGEPGSGRTSLAAGANLRRPYGSPTRGEMEAGGWGVWLFDQGVVLDMPGMTEQPTEEWRAVLQRLKRVRGQRPIDGLMLTVSATHLTGPKALDDVGLERMAQGLFQGLQALRRELGVRVPVFIVITRSDVIPGFTAFCRSLPPRRRDEMLGWSSPYSPQEPYTSAWVDEAFQVIHRELCGLQLELLADGHGTQPDRETSFLFPSELRALAGPVRRLLDVLFQSSAFTQPALLRGLYFCGDPEAEGATGPGGSPRSLAFITHLLERKAFPESGLASPDAEAARINRRGVGLLQGALAVSVLLAVLFLGVLWKGVRGREQPPAPPPVAVVEPVVEPPPEAPPPRKEAPARRRPAPRPAQSTVFDDAPPPRPTRAGDSPFDDAPPPPSTRAGDSPFDDAPPPPSTRAGDSSFDDAPPPPLSSPSP
Protein structure:
AlphaFold
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Main properties of effector
Molecular weight Sequence length Theoretical pI GRAVY Instability index
49203 455 6.69 -0.359 72.65
Plant infestation information
Experimental plant:
Susceptible plant: Disease name:
Host classification: NCBI Species:
Pathogen-plant protein interaction
Uniprot ID Protein name Gene name Species Protein sequence
No Record found.