Effector profile
PlantPEAD ID: PlantPEAD40963 | Uniprot ID: A0A0P9N318 | Source: Orthologous |
Localization: Cytoplasmic(Pre) | Pathogen taxonomy ID: 86840 | Pathogen type: Bacteria |
Species: Pseudomonas cannabina | Strain: | Other name: |
Gene name: | NCBI Gene ID: LJPX01000182 | |
Entry name: A0A0P9N318_PSECA | Protein name: tetrahydrofolate synthase | |
DOI: |
Gene/Protein information
Gene sequence:
ATGACCCCTGTAACCCTGGGCGACTGGATCGCCTATCTGGAGCAACTGCATCCATCGGCCATCGACATGGGGCTGGATCGCTCGCGACAGGTAGCGCAGCAGTTGGGCCTGACCAGGCCTGCTCCCAGGGTCATCACTGTCACCGGCACCAATGGCAAAGGCTCGACCTGCGCTTTTATCGCCGCGTTGCTGCAAGCCCAAGGGCTGAAAACCGGGGTTTACAGCTCGCCGCATCTGGTTCGCTACAACGAGCGGGTAAAGGTGCAGGGTGTCGAAGCAACCGATGCCGAGTTGTGCGAAGCCTTTGCAGCCGTCGAGGCAGCGCGTGATGGCGTCACCCTGACGTACTTCGAAATGGGCACGCTGGCAGCCTTCTGGCTGTTCGAGCAGGCTCAGCTTGACGCCGTGGTGCTGGAAGTTGGCCTGGGCGGTCGTCTGGACGCGGTGAACCTGATTGACGCGGATTTCGCGCTGGTGACCAGTATCGGTGTCGATCATGCCGAGTGGCTGGGTGATAGCCGCGAATCGGTTGCGTTCGAAAAAGCCGGTATTTTTCGGTCTGCACGCCCCGCGCTGTGCGGTGATCCGGCTCCACCCGAGCCGCTGCTGGAGAAGGCCCGAGAACTGGGCTGCCCGCTGTTGCTGCGCGGCGCGGATTTCGACCTGACCGTGGGTCCGGACAGTTGGGACTGGCGCGGCGTCGCGCATGGCGAACAGGTTGAACTGCGAGGTTTGCCGTTGCTCGATCTGCCCATGCAGAATGCCGCGCTGGCCCTCCAGTTGTATGCTCTCTTGGGCTATCCGCTGGAGTCCGCCGCGTTGGGGCAGGTGCTGGCCCGCACGCGGCTTGCCGGGCGCCTTGATCGCCGCATCTTCCACTGGCAGGGCAAGCGCCTCAATCTGCTTCTGGACGTGGGCCACAATCCGCATGCCGCGCAGTTTCTGCACCAGCGTCTGACGCAGCTCCCGATTGTCGGCAAGCGCTACGCCGTGTTCGGTCTGCTGAGTGACAAGGACCTTGCAGGCGTGGTCGCTCCTCTGGTGTCTGTCATCGACAAATGGGCCGTCGCGGCGCTGCCCACTCCGCGCAGCAGGCCTGCCGAAGCGTTGCAGGCGGCGTTGCAGAACCTTGGCGCCTGCGTGACGTCCTATCAGAGTATTGCGCCAGCATTGGAGGCTCAGTGCGCGCACGCCACGGCCGATGATGAAATTCTGCTGTTCGGATCTTTTTACTGTGTTGCCGAGGCCCTTGAATGGCTGGCCCTGCACACCGACGAGGAAGCTGCAAATGGCTTTGCTGGATAA
Protein sequence:
MTPVTLGDWIAYLEQLHPSAIDMGLDRSRQVAQQLGLTRPAPRVITVTGTNGKGSTCAFIAALLQAQGLKTGVYSSPHLVRYNERVKVQGVEATDAELCEAFAAVEAARDGVTLTYFEMGTLAAFWLFEQAQLDAVVLEVGLGGRLDAVNLIDADFALVTSIGVDHAEWLGDSRESVAFEKAGIFRSARPALCGDPAPPEPLLEKARELGCPLLLRGADFDLTVGPDSWDWRGVAHGEQVELRGLPLLDLPMQNAALALQLYALLGYPLESAALGQVLARTRLAGRLDRRIFHWQGKRLNLLLDVGHNPHAAQFLHQRLTQLPIVGKRYAVFGLLSDKDLAGVVAPLVSVIDKWAVAALPTPRSRPAEALQAALQNLGACVTSYQSIAPALEAQCAHATADDEILLFGSFYCVAEALEWLALHTDEEAANGFAG
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Main properties of effector
Molecular weight | Sequence length | Theoretical pI | GRAVY | Instability index |
---|---|---|---|---|
46696.5 | 434 | 5.07 | 0.151 | 30.52 |
Plant infestation information
Experimental plant: | |
Susceptible plant: | Disease name: |
Host classification: | NCBI Species: |
Pathogen-plant protein interaction
Uniprot ID | Protein name | Gene name | Species | Protein sequence |
---|
No Record found.
External Links
Interpro: IPR001645,IPR036565,IPR036615,IPR013221
Pfam: PF08245
SMART:
KEGG:
PRINTS: