Effector profile
PlantPEAD ID: PlantPEAD40996 | Uniprot ID: A1TNA6 | Source: Orthologous |
Localization: Cytoplasmic(Pre) | Pathogen taxonomy ID: 80869 | Pathogen type: Bacteria |
Species: Paracidovorax citrulli | Strain: strain AAC00-1 | Other name: Acidovorax citrulli |
Gene name: | NCBI Gene ID: CP000512 | |
Entry name: A1TNA6_PARC0 | Protein name: Dihydrofolate synthase/folylpolyglutamate synthase | |
DOI: |
Gene/Protein information
Gene sequence:
ATGCACACCACTTTCGACACCCTGGACGGCTGGCTGGCCCATTGCGAACGCATCCACCCGAAAACCATCGACATGGGCCTGGAGCGGGTGGGCGAGGTGGCGCGCCGGCTCGGGCTGCGTTTCACCTGCCCCGTCATCACGGTGGCCGGCACGAACGGCAAGGGTTCCACCTGCGCCATGCTGGAGGCGGTGGCGCTGCAGTCGGGCTACCGCACCGGCGTCTATACCTCGCCGCACCTCGTGAAGTTCGAGGAGCGCTGCCGCATCCGGGGCGAGAGTGTCGGGGCGGACGATCTGGTCCCGCACTTCGCGGCCGTGGAGGCGGCGAGAACGCATGGCGGCGCGGAGGTGTCCCTGTCCTACTTCGAGTTCACCACGCTCGCCATCCTGCGCCTCATGAGCCAGGCGGGCCTGGATGTCGCCATCCTGGAGGTGGGCCTGGGCGGCCGCCTCGACGCGACCAATGTCGTGGATACCGACTGCGCGGTCATCACCAGCATCGACATCGACCACACGGAGTTCCTGGGACCGGACCGCGAATCCATCGGCCGGGAGAAGGCCGGCATCATGCGGCCGGGCCGTCCCGCCATCGTCAGCGACCCCATGGCACCGCAGAGCGTGCTGGACCACGCGCGCGCCCTCGGAGCCGACCTGTGGCAGTTCGGCCAGGACTTCAATTTTTCCGGCGACAAGCAGCAGTGGGCCTGGGCGGGGCGGGGTCGCCGCTATGCCGGGCTGGCCTACCCGGCACTGCGGGGGGCCAACCAGCTGGTCAACGCCTCCGGCGTGCTGGCCGCCCTGGAGGCGCTGCGCGACCGGCTGCCGATCACGGCCCAGGCCGTGCGCACCGGCCTGGCCATGGTGGAGCTGCCGGGGCGCTTCCAGATCGTCCCGGGCCAGCCCACCCTGGTACTGGACGTGGCCCACAACCCGCATTCGGTGGCGGCGCTCACCGCCAACCTGGACGCCATGGGCTTTTTCCCGACCACCCATGCGGTGTTCGGCGCCATGGCCGACAAGGACCTCGCTCCCATGCTGGCCCGCATCGGCCCGCTGGTGGACCGCTGGTACTTCACCGACCTGCCGACGCCGCGTGCCGAAACCGCCGCCGCCCTGCAGCAGAAGTGGAACGCCCTGCAGATCGTCGCCGGCGGACGCCGCGAAGTGCGCACCAGCCTGCACCCGGACCCATGGCAGGCGCTGCAGGCGGCCGTGGCCGCTGCAGAGCCGACTGATAGAATCGTGGTCTTTGGCTCCTTCTATACGGTCGGCGGTGTGCTGCACCACGGAACGCCCCGCCTGCAGGCCAAGCACCTGGGCACTTGA
Protein sequence:
MHTTFDTLDGWLAHCERIHPKTIDMGLERVGEVARRLGLRFTCPVITVAGTNGKGSTCAMLEAVALQSGYRTGVYTSPHLVKFEERCRIRGESVGADDLVPHFAAVEAARTHGGAEVSLSYFEFTTLAILRLMSQAGLDVAILEVGLGGRLDATNVVDTDCAVITSIDIDHTEFLGPDRESIGREKAGIMRPGRPAIVSDPMAPQSVLDHARALGADLWQFGQDFNFSGDKQQWAWAGRGRRYAGLAYPALRGANQLVNASGVLAALEALRDRLPITAQAVRTGLAMVELPGRFQIVPGQPTLVLDVAHNPHSVAALTANLDAMGFFPTTHAVFGAMADKDLAPMLARIGPLVDRWYFTDLPTPRAETAAALQQKWNALQIVAGGRREVRTSLHPDPWQALQAAVAAAEPTDRIVVFGSFYTVGGVLHHGTPRLQAKHLGT
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Main properties of effector
Molecular weight | Sequence length | Theoretical pI | GRAVY | Instability index |
---|---|---|---|---|
47500.3 | 441 | 6.43 | 0.005 | 29.73 |
Plant infestation information
Experimental plant: | |
Susceptible plant: | Disease name: |
Host classification: | NCBI Species: |
Pathogen-plant protein interaction
Uniprot ID | Protein name | Gene name | Species | Protein sequence |
---|
No Record found.
External Links
Interpro: IPR001645,IPR018109,IPR036565,IPR004101,IPR036615,IPR013221
Pfam: PF02875,PF08245
SMART:
KEGG: aav:Aave_1860
PRINTS: