Effector profile
| PlantPEAD ID: PlantPEAD41131 | Uniprot ID: A1TW10 | Source: Orthologous |
| Localization: Cytoplasmic(Pre) | Pathogen taxonomy ID: 80869 | Pathogen type: Bacteria |
| Species: Paracidovorax citrulli | Strain: strain AAC00-1 | Other name: Acidovorax citrulli |
| Gene name: | NCBI Gene ID: CP000512 | |
| Entry name: A1TW10_PARC0 | Protein name: Short-chain dehydrogenase/reductase SDR | |
| DOI: | ||
Gene/Protein information
Gene sequence:
TCAGCGCCGCTGGCGCCCGGCCCACCAGCCGTAGGCGATGCCCGCCACGCCCAGGGCCACCACCAGCCCCACCGCGCCGGCGCGGCGCTTGCGGTGGCCGCCCGCCACCGCCGTGCCCTGCGAGGGCGCGAAGAGATTGCCGTCGCTTTCGGGCTCCGGCCGCGCCCGCGCGAGGCCCCAGTCGGAGAGGCAGCGCATCCAGCGCGCCACGGTGTCCGGCGCCACCGCATGCGCCACCCGGCCGGGCAGCGCGCCCAGGCCCATCCAGGTCACGGAGCGCGGACGCAGGGCCCTCGACAACCCCACCACGGTTTCGGCGACCCGGTGCGGATCGACCATCGGCAGCGGCGGCCGGATGCGCCGGCCCGTGTAGTTGGCGCCATGCGAGAGGCCGGGCGAATCGACGAAGGTCGGCGCCACGTCGCAGACATGCACGTGCGGCAGATCGGACACCTCGGCGCGCAGGCTCTCGGACAGGCCCCGCAGGCCGAACTTGCTGGCGGTGTAGGCCGCGGCGTAGGGCGCCGGCACCCAGCCGCCTATGGAGATCAGGTTGATGAGCCGCCCCACCCCGCGCTCGCGGAAATGCGGCAGCACGGCGTGCGCGCCGTGCAGGTGCCCCAGCAGGTTGGCCTCCAGCACCCGGCGGTGGGCCTCCACCGGCACCTCGTCGAAGCGGCCTATCGCGCCCACGCCCACGCCGTTCACCCAGACGTCGATGCGGCCGAAATGCCGCAGCGCCTTCTGCGCAAGCACGCGCACCGCGGAGGCATCGGTCACGTCGGTGGGCACGCCGATGGCATGGCCGCCGGCCTTGCGGCAGGCCAGCGCCACGGGGGCCAGCGTATCGGGATTGCGCGATGCCAGCACCAGGCAGGCCCCGCGCCGCGCGAAGGCCAGCGCGATGGCATGGCCGATACCGCTGGAGGCACCGGTGATGACCACCACCGGATGCTCGGGCACGTGGGCGGCGTCGGCCGCCCGGGCCTGCGTGTCCGCGTCGGCCGTCTCGGGATCGGAGGAAGAGGGATCTTCGCGCAGGGCGCGATCGGGATCGTCGGAAAGGGGCAT
Protein sequence:
MPLSDDPDRALREDPSSSDPETADADTQARAADAAHVPEHPVVVITGASSGIGHAIALAFARRGACLVLASRNPDTLAPVALACRKAGGHAIGVPTDVTDASAVRVLAQKALRHFGRIDVWVNGVGVGAIGRFDEVPVEAHRRVLEANLLGHLHGAHAVLPHFRERGVGRLINLISIGGWVPAPYAAAYTASKFGLRGLSESLRAEVSDLPHVHVCDVAPTFVDSPGLSHGANYTGRRIRPPLPMVDPHRVAETVVGLSRALRPRSVTWMGLGALPGRVAHAVAPDTVARWMRCLSDWGLARARPEPESDGNLFAPSQGTAVAGGHRKRRAGAVGLVVALGVAGIAYGWWAGRQRR
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Main properties of effector
| Molecular weight | Sequence length | Theoretical pI | GRAVY | Instability index |
|---|---|---|---|---|
| 37497.8 | 356 | 9.84 | -0.017 | 42.53 |
Plant infestation information
| Experimental plant: | |
| Susceptible plant: | Disease name: |
| Host classification: | NCBI Species: |
Pathogen-plant protein interaction
| Uniprot ID | Protein name | Gene name | Species | Protein sequence |
|---|
No Record found.
External Links
Interpro: IPR036291,IPR020904,IPR002347
Pfam: PF00106
SMART:
KEGG: aav:Aave_4611
PRINTS: PR00081,PR00080