Effector profile
PlantPEAD ID: PlantPEAD41137 | Uniprot ID: A0A7Z7FP58 | Source: Orthologous |
Localization: Cytoplasmic(Pre) | Pathogen taxonomy ID: 1176649 | Pathogen type: Bacteria |
Species: Agrobacterium fabrum | Strain: | Other name: Agrobacterium tumefaciens |
Gene name: | NCBI Gene ID: FNEW01000001 | |
Entry name: A0A7Z7FP58_9HYPH | Protein name: NADP-dependent 3-hydroxy acid dehydrogenase YdfG | |
DOI: |
Gene/Protein information
Gene sequence:
TCAGGCAGCGGTGGGGCGGATGACGATTTCATTGACATCGACATCGTCGGGCTGCTCGATGGCGTAACGCACCGCACGGCCGATAGCGTCGGGCTTCAGGGCGATGGCCCGGTAGCTCTGCATCAGTTCCGCGGCGGCCGGATCGGTGATGGTGTGGGCGAGTTCGCTTTCCACCACGCCGGGGTGAATGCAGGTGACGCGCAGGTCACGGTTTTCCTGACGCAGCCCGTCCGAAATGGCGCGGACCGCAAATTTCGTCGCGCAATAAACGGCAGCCGTCGGCGAGACGGCCAGCGCACCGATGGAGGCGATGTTGATGATGTGTCCGGAAGCGCGTGCCGTCATTTCCGGCAGCACCGCGGCGACGCCGTAAAGCACACCCTTGATGTTGACGTCGATCATGCGGTCCCATTCGTCGACTTTGAGCGACGACATCAGCGACAGCGGCATGATGCCCGCATTGTTGACGATAACGTCGATCTGGCCGAAGGCCTTGCGTCCCGCCTCGGCAAAAGCCTCGACGCTGTGCCTGTCCGTTACATCAAGCGTATGGATGACGACCTCGGCACCCTTCCGACGCAACTCTTCCGCGAGGGACTGCAAACGGTCCATGCGGCGTGCGCCGAGCACCAGCTTCGCCCCGGCGCCCGCAAGCTCCCTTGCTATGCCCTCACCGATCCCGCTCGATGCACCCGTGATGAGAACGACTTTGTTCAATGTCAT
Protein sequence:
MTLNKVVLITGASSGIGEGIARELAGAGAKLVLGARRMDRLQSLAEELRRKGAEVVIHTLDVTDRHSVEAFAEAGRKAFGQIDVIVNNAGIMPLSLMSSLKVDEWDRMIDVNIKGVLYGVAAVLPEMTARASGHIINIASIGALAVSPTAAVYCATKFAVRAISDGLRQENRDLRVTCIHPGVVESELAHTITDPAAAELMQSYRAIALKPDAIGRAVRYAIEQPDDVDVNEIVIRPTAA
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Main properties of effector
Molecular weight | Sequence length | Theoretical pI | GRAVY | Instability index |
---|---|---|---|---|
25558.5 | 240 | 5.98 | 0.195 | 35.29 |
Plant infestation information
Experimental plant: | |
Susceptible plant: | Disease name: |
Host classification: | NCBI Species: |
Pathogen-plant protein interaction
Uniprot ID | Protein name | Gene name | Species | Protein sequence |
---|
No Record found.
External Links
Interpro: IPR036291,IPR020904,IPR002347
Pfam: PF00106
SMART: SM00822
KEGG:
PRINTS: PR00081,PR00080