Effector profile
| PlantPEAD ID: PlantPEAD41152 | Uniprot ID: I4MYK2 | Source: Orthologous |
| Localization: Cytoplasmic(Pre) | Pathogen taxonomy ID: 286 | Pathogen type: Bacteria |
| Species: Pseudomonas | Strain: sp. M47T1 | Other name: |
| Gene name: | NCBI Gene ID: AJWX01000026 | |
| Entry name: I4MYK2_9PSED | Protein name: Short-chain dehydrogenase/reductase sdr | |
| DOI: | ||
Gene/Protein information
Gene sequence:
TCACAGCTCCTGGCGCGTGGGGCGGACGAGTGGCGAATGCGGCATCAGCCCGGCGTTGTTGATCATCACGTCCACCCGGCCGAAGCTATCCACAGCCAACCTGACCAGCGCCTTGACCTGGTCGGCGCGGGTGACGTCGGTTTTCAGCGCCAGCGCCTCGCCGCCGTCGGCGCGAATGGCCTCCGCCACCGCTTCGATACGCTCCAGGCGCCACGCGCCCAGCACCACGCGGGCGCCCTGTGCAGCCAGGTGACGGGCGGTGGCATCGCCCAGGCCGCTGCTGGCGCCGGTAATGACAATGACCTTGCCGGTGACGTTGATGCTCAT
Protein sequence:
MSINVTGKVIVITGASSGLGDATARHLAAQGARVVLGAWRLERIEAVAEAIRADGGEALALKTDVTRADQVKALVRLAVDSFGRVDVMINNAGLMPHSPLVRPTRQEL
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Main properties of effector
| Molecular weight | Sequence length | Theoretical pI | GRAVY | Instability index |
|---|---|---|---|---|
| 11353.1 | 108 | 9.67 | 0.204 | 23.36 |
Plant infestation information
| Experimental plant: | |
| Susceptible plant: | Disease name: |
| Host classification: | NCBI Species: |
Pathogen-plant protein interaction
| Uniprot ID | Protein name | Gene name | Species | Protein sequence |
|---|
No Record found.
External Links
Interpro: IPR036291,IPR002347
Pfam: PF00106
SMART:
KEGG:
PRINTS: PR00081