Effector profile
PlantPEAD ID: PlantPEAD41185 | Uniprot ID: A0A183CEJ1 | Source: Orthologous |
Localization: Cytoplasmic(Pre) | Pathogen taxonomy ID: 36090 | Pathogen type: Nematoda |
Species: Globodera pallida | Strain: | Other name: Potato cyst nematode |
Gene name: | NCBI Gene ID: NONE | |
Entry name: A0A183CEJ1_GLOPA | Protein name: 3-dehydrosphinganine reductase | |
DOI: |
Gene/Protein information
Gene sequence:
NONE
Protein sequence:
MEMARRNDHSSRRPQQRRLNNAENSSDIDGTAHRVASVTLNNTESDSRTSADVPMYSLRSKRRKKLPRREKQAIGTVADMEVDEHQPPWKKLSVNTPDNGLIPTCKVQMDWDHGEGSSTIDNVHSIRSTRRSALDMENNQSDQFSLSDSEDSTSNIDADDEQSDWPGNELACRPPLPPSLGPFQLVPPPPRVALISQKDAALSAEAIKRIEQFLQNSDDSELLLDKVYRTSAVKQMLRQSEIMGKKRQWRASQGGMEPGKVHKLTVNLEFGGVRVERFTAEDFQALVDSAISRVLGAAAPTYAVCSFDRHAMRGALLADGTDLHILWAALSVYGMHFEQPMAFHLYSVHRQQDKLNKVNKFVLPKRLPFDPAGKHCLVTGGSRGIGKAIGVELLCRGCRSLSLVARDPIALELAKKELEEYLQPGQSVRTYPVDLADEPGKIEAVVREAERHAGAVDLLVNNAGTCVQGAFDELPNDAFERQLRINFLGAVHVTRAVVGDMKRRRFGHISFVCSAAGQLAIWGYSAYSPSKFALRGFADALHMELLPWNVGVSILFPPNTVTDGFREELRTMTPQIRAISGTAGLYQPRDVAESLVCSIRGGHFATTIGLEGWMLGVLSASTAPEPDSLRAFLQILLAGLFRGVFLLYGGHFNRLVRNCHEREEAAGDTDT
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Main properties of effector
Molecular weight | Sequence length | Theoretical pI | GRAVY | Instability index |
---|---|---|---|---|
74168.1 | 671 | 6.69 | -0.364 | 50.48 |
Plant infestation information
Experimental plant: | |
Susceptible plant: | Disease name: |
Host classification: | NCBI Species: |
Pathogen-plant protein interaction
Uniprot ID | Protein name | Gene name | Species | Protein sequence |
---|
No Record found.
External Links
Interpro: IPR045022,IPR036291,IPR002347
Pfam: PF00106
SMART: SM00822
KEGG:
PRINTS: PR00081,PR00080