Effector profile
| PlantPEAD ID: PlantPEAD41234 | Uniprot ID: H3RKU1 | Source: Orthologous |
| Localization: Cytoplasmic(Pre) | Pathogen taxonomy ID: 66269 | Pathogen type: Bacteria |
| Species: Pantoea stewartii | Strain: subsp. stewartii DC283 | Other name: Erwinia stewartii |
| Gene name: | NCBI Gene ID: AHIE01000039 | |
| Entry name: H3RKU1_PANSE | Protein name: EscU/YscU/HrcU family type III secretion system export apparatus switch protein | |
| DOI: | ||
Gene/Protein information
Gene sequence:
TTACACATGAGCGTCGTAATCGAGATTCAGTACCATACGCAGCAAAGCGGCAACGGGTTCAAACAGGGATTCAGAGATCGCCTCGCCCGATTTAACGCTAAAAAATAGCTTGCGCGCCAACGCAATATTCTCCACCACAGGAACAGACTCCCTGATGGCGAGAGCAACAATATGTTCTGCCCTCGCCTCTACGCCTTTTTCGAGAACCGTTGGGATCGGCGTGTCTACAGGATCGTAGCCTAGGCAAATGGCGATATGCGTAGGGTTGCGAATAACGACCGCAGACTGCTTCACATTCTGCGCTAAACTGCCACTTTGCATTTCGCGTTGTACTTCACACCGACGTTTTTTAACCTGCGGATCACCTTCAAGATCTTTGGTCTCCTGTTTGACATCCTCCTTACTCATTCGCTGCTGTTTCATCGTATTGTGCGTCTGAAAGGCATAATCAACAACGCTCAGTACCACGTAAAACGTCAGCAATGCATACCATATCCAGCGGATCATAATCCTGAAAAGGGGGATCGCGCAGCTCGCATTACAGTATGGAAGTACCTCATAAATTGCCAAAAAATAGCGGAAAAGAGAGATAAAAATCAGACATAATGCGATGACTTTCAGACAGGATTTAAATAACTCCACTAGGCTGTGCACTGAAAAAATCTGTTTAAGATTGTTCACCGGATTAATTTTTTCGCCTTTGAAGCCGACCGCCTTTATGGCAAGCATAAATCCGACCTGTGCGACCAGGCTTGCAATGGTCGCCGCCGCCAGCATACCGCCAAACAGGGCAAAAAATTCGCCTCCGGCATGCACTAATACCTGCGTCAACAGACTGAAGGCATAGTCAAAGGGTTGATTGATCAGTCGTGAAGCCAGCAACATCAGCTCAGCAATCTGATGAAACACCTCATCAGCAAAAAAATGAAAAAAAGCCAGTATTGTCAGCAGCTGGATGCCGGAGGTTATCTCCAGACTTTTGATAACCTGTCCCTCCTGGCGGCTATCACGCTTTTTTTTCTCGGTAGGCTGCTCGGTTTTTTCACTCAT
Protein sequence:
MSEKTEQPTEKKKRDSRQEGQVIKSLEITSGIQLLTILAFFHFFADEVFHQIAELMLLASRLINQPFDYAFSLLTQVLVHAGGEFFALFGGMLAAATIASLVAQVGFMLAIKAVGFKGEKINPVNNLKQIFSVHSLVELFKSCLKVIALCLIFISLFRYFLAIYEVLPYCNASCAIPLFRIMIRWIWYALLTFYVVLSVVDYAFQTHNTMKQQRMSKEDVKQETKDLEGDPQVKKRRCEVQREMQSGSLAQNVKQSAVVIRNPTHIAICLGYDPVDTPIPTVLEKGVEARAEHIVALAIRESVPVVENIALARKLFFSVKSGEAISESLFEPVAALLRMVLNLDYDAHV
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Main properties of effector
| Molecular weight | Sequence length | Theoretical pI | GRAVY | Instability index |
|---|---|---|---|---|
| 39267.1 | 349 | 7.64 | 0.295 | 42.9 |
Plant infestation information
| Experimental plant: | |
| Susceptible plant: | Disease name: |
| Host classification: | NCBI Species: |
Pathogen-plant protein interaction
| Uniprot ID | Protein name | Gene name | Species | Protein sequence |
|---|
No Record found.
External Links
Interpro: IPR006307,IPR006135,IPR029025
Pfam: PF01312
SMART:
KEGG: pstw:DSJ_23815
PRINTS: PR00950