Effector profile
| PlantPEAD ID: PlantPEAD41237 | Uniprot ID: A0A3M4W926 | Source: Orthologous |
| Localization: Cytoplasmic(Pre) | Pathogen taxonomy ID: 36746 | Pathogen type: Bacteria |
| Species: Pseudomonas cichorii | Strain: | Other name: |
| Gene name: | NCBI Gene ID: RBRY01000041 | |
| Entry name: A0A3M4W926_PSECI | Protein name: Type III secretion protein, YscU/HrpY family | |
| DOI: | ||
Gene/Protein information
Gene sequence:
TCAATAGTGAGGCATCTCGATCGTGTCCCCTTTTGCCTGTTCATCGATTTCGCGTAACAAACGATAAACCTGCGCCACAGCCTGCAGGGTGGCCCGTGGAATGAACTGCCCGACGTTTTCGCGATACAGCGTCCGTGCCAGCCAGACGAAGCGCACCACGGGCACGCCAGCCTTGCGGGCGCGCTCGATGAGTTCCCGGGCATCGGCGTCGCGACCCTTGCAAATGATGCGCGGCAACGGCGTCTGTTCAGGGCGATAGAAGAGCGCCACGGCAAAGTGGGTCGGATTGACCAGCAGCATGTCGGCGTCTTCGACCGGTGCCTGGGCCGGGGCCGCGGAGCCGGGTTTCTCGGAGATTTCCCGGGCCAGGGACTTGCGGTGGGACTTCATGTGCGGGTCGCCTTCGGATTCCTTGTACTCCTTGCGGATATCTTCATGGCTCATGCGCTGACCCTTGATGAAGAAGTACTTCTGCAGGGCGAAGTCAAGGATTGCCAGCACCAGCAGCAAGCCCAGACAGATACGTGACAGGCGTCTGAACAGGTCGACCAGCGCTTTCCAGTAACTGTCCAGATCCGTCTGGGCAAGGCCGATCAGGTCGCCCAGTGACGGCGGCAGGAGCCAATACAGTACGAGGGTGATCATCACCGCCTTGCACAGGCTGTTGAACAGGTTGAACAACTGGCGCGAAGAGAACATCTGCTGGAACTGATTGATGGGGTTCAGGCGCTCGAAGTCCAGCTTCAGGGCCTCGGTGGCGAACAGCGGCCCGAACTGGACCCAGCCGCCGGCCAGGCGCATGACTACGGCAACCCCCAGGACCGGGAGCATGAACAGCAACAACTCCAGGCCAGCCTTGGTCATCACCTCGCCAAGGGCGGCGCCGAAGGGCCGATCCAGCTCCATGATGGGCAGAATCATCAGCTCTTTGAGGCGCTCCATGCCGGAGTCCACCATGGTCAGGATCATCTCGATCAAGGCCGCGAAAATGAACAGTTTGGGAATATCCTGACTTTGCCCGACCTGACCTTTCTTGCGTGCGTCGTCGAGCTTTTTCTGCGTGGGTTCTTCTGTTTTTTCGCTCAT
Protein sequence:
MSEKTEEPTQKKLDDARKKGQVGQSQDIPKLFIFAALIEMILTMVDSGMERLKELMILPIMELDRPFGAALGEVMTKAGLELLLFMLPVLGVAVVMRLAGGWVQFGPLFATEALKLDFERLNPINQFQQMFSSRQLFNLFNSLCKAVMITLVLYWLLPPSLGDLIGLAQTDLDSYWKALVDLFRRLSRICLGLLLVLAILDFALQKYFFIKGQRMSHEDIRKEYKESEGDPHMKSHRKSLAREISEKPGSAAPAQAPVEDADMLLVNPTHFAVALFYRPEQTPLPRIICKGRDADARELIERARKAGVPVVRFVWLARTLYRENVGQFIPRATLQAVAQVYRLLREIDEQAKGDTIEMPHY
Loading ...
Main properties of effector
| Molecular weight | Sequence length | Theoretical pI | GRAVY | Instability index |
|---|---|---|---|---|
| 41035.2 | 361 | 8.3 | 0.011 | 38.68 |
Plant infestation information
| Experimental plant: | |
| Susceptible plant: | Disease name: |
| Host classification: | NCBI Species: |
Pathogen-plant protein interaction
| Uniprot ID | Protein name | Gene name | Species | Protein sequence |
|---|
No Record found.
External Links
Interpro: IPR006307,IPR006135,IPR029025
Pfam: PF01312
SMART:
KEGG:
PRINTS: PR00950