Effector profile
| PlantPEAD ID: PlantPEAD41239 | Uniprot ID: Q20IQ3 | Source: Orthologous |
| Localization: Cytoplasmic(Pre) | Pathogen taxonomy ID: 36746 | Pathogen type: Bacteria |
| Species: Pseudomonas cichorii | Strain: | Other name: |
| Gene name: HrcU | NCBI Gene ID: DQ168848 | |
| Entry name: Q20IQ3_PSECI | Protein name: HrcU | |
| DOI: | ||
Gene/Protein information
Gene sequence:
ATGAGCGAAAAAACCGAAGAACCCACGCAGAAAAAGCTCGATGACGCACGCAAGAAAGGTCAGGTCGGGCAAAGCCAGGATATTCCCAAGCTGTTCATTTTCGCGGCCCTGATCGAAATGATCCTGGCCATGGTGGACTCCGGCATGGAGCGTCTCAAGGAACTGATGGTACTGCCCATCATGGAGCTGGATCGGCCCTTCGGCGCAGCCCTTGGCGAGGTGATGACCAAGGCAGGCCTGGAGTTGCTGCTGTTCATGCTCCCGGTACTGGGTGTTGCCGCAATCATGCGGCTGGCCGGCGGCTGGGTCCAGTTCGGGCCGCTGTTCGCCACCGAAGCCCTGAAGCTGGACTTCGAGCGGCTCAACCCCATCAACCAGTTCCAGCAGATGTTCTCTTCGCGCCAGTTGTTCAACCTGTTCAACAGCCTGTGCAAGGCGGTGATGATCACCCTCGTGCTGTATTGGCTCCTGCCACCGTCACTGGGCGACCTGATCGGCCTTGCCCAGACGGATCTGGACAGCTACTGGAAAGCACTGGTCGACCTGTTCAGACGCCTGTCACGCATCTGTCTGGGCCTGCTGCTGGTGCTGGCCATCGTCGACTTTGCCCTGCAGAAATACTTCTTCATCAAGGGTCAGCGCATGAGCCATGAAGATATCCGCAAGGAATACAAAGAGTCCGAAGGCGACCCGCACATGAAGTCCCACCGCAAGTCCCTGGCCCGGGAAATCTCCCAGCAACCCGGCTCTGCCGCCCCGGCCAAAGCGCCGGTGGAAGACGCCGATATGCTGCTGGTCAACCCGACCCACTTTGCCGTGGCCCTTTTCTATCGTCCCGAACAGACGCCGCTGCCGCGCATCATTTGCAAGGGGCGCGATGCCGATGCCCGGGAACTCATCGAGCGCGCCCGCAAGGCAGGCGTGCCGGTGGTGCGCTTCGTCTGGCTGGCACGAACGCTGTATCGCGAAAACGTGGGCCAGTTCATTCCCCGGGCCACTTTGCAGGCAGTGGCGCAGGTTTATCGTCTGCTGCGTGAAATCGATGAACGGGAAAAAGGGGACGTGATCGAGATGCCGCACTATTAA
Protein sequence:
MSEKTEEPTQKKLDDARKKGQVGQSQDIPKLFIFAALIEMILAMVDSGMERLKELMVLPIMELDRPFGAALGEVMTKAGLELLLFMLPVLGVAAIMRLAGGWVQFGPLFATEALKLDFERLNPINQFQQMFSSRQLFNLFNSLCKAVMITLVLYWLLPPSLGDLIGLAQTDLDSYWKALVDLFRRLSRICLGLLLVLAIVDFALQKYFFIKGQRMSHEDIRKEYKESEGDPHMKSHRKSLAREISQQPGSAAPAKAPVEDADMLLVNPTHFAVALFYRPEQTPLPRIICKGRDADARELIERARKAGVPVVRFVWLARTLYRENVGQFIPRATLQAVAQVYRLLREIDEREKGDVIEMPHY
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Main properties of effector
| Molecular weight | Sequence length | Theoretical pI | GRAVY | Instability index |
|---|---|---|---|---|
| 41046.3 | 361 | 8.62 | 0.009 | 38.12 |
Plant infestation information
| Experimental plant: | |
| Susceptible plant: | Disease name: |
| Host classification: | NCBI Species: |
Pathogen-plant protein interaction
| Uniprot ID | Protein name | Gene name | Species | Protein sequence |
|---|
No Record found.
External Links
Interpro: IPR006307,IPR006135,IPR029025
Pfam: PF01312
SMART:
KEGG:
PRINTS: PR00950