Effector profile
| PlantPEAD ID: PlantPEAD41253 | Uniprot ID: A1TJC2 | Source: Orthologous |
| Localization: Cytoplasmic(Pre) | Pathogen taxonomy ID: 80869 | Pathogen type: Bacteria |
| Species: Paracidovorax citrulli | Strain: strain AAC00-1 | Other name: Acidovorax citrulli |
| Gene name: | NCBI Gene ID: CP000512 | |
| Entry name: A1TJC2_PARC0 | Protein name: Type III secretion protein, YscU/HrpY family | |
| DOI: | ||
Gene/Protein information
Gene sequence:
TCAGCGCGGGCTGCCGCCGCCGAGCCGGTCGAGTTCGGCCACCCAGCGCAGCACGACGGAGACGGCTTCGAACAGTTCCTCGGGAATGGGCTGGTCCAGCGGCAGCTTGTGCAGGGCGCGCGCCAGCGGCGGATTGGCGATGAGCGGGATGTGGTGCAGCGCGGCCAGGCCGCGGATGACGGCCGCCTGTTCGTCCATGCCCTTGGCCACGACGATGGGCAACGGGGTCGCGCCGGCTTCGTAGCGCAGCGCCACGGCGTAATGGGTGGGGTTGGTGACGACCACCGTGGCGCCCGGCACCCGTTCCTGCGGCGGCGATGTCGCCATTTCCTCGCGCAGCGACTTGAGATGGCCCTTGAGGTGCGGATCGCCTTCGCTGTCCTTGTTCTCGCGCTTCACGTCGTCCTTGCTCATGCGCTGGTCCCGCATGAAGAGCCAGTGCTGCAGGCCGAAGTCGAGGGGGCCGATGACCAGGAAGACGAGGAATGCGAACGAAAAGAGTTTCAGCAGCGCGCTCCAGGCGATCTGTCCGCTGGCCTCGGGCGTGAGATAGACGGAGCCCACGAGCAGGGGTACCAGCCCGGTCACGATGTGCCACAGCACGGCGCCGAAGACGACGGCCTTGAGGACGGACTTGGCGAATTCGACGAGCGACCGCGCGTTGAACATCTTCTTGAGTCCTTCGGCCGGGTTCAGGCTGTCGAACTTGGGCGTGAGGGGCTCGAAGGTGATCATGAAGCCGACCTGCGGCAGCAGGGCCAGCACGGCCACCAGCACCGAGACGATGACCATGCCGAAGGCAACCGCCATGCCGTCGAGCGCCATGGAGGACAGCAGCGCCAGCAGCTCCTGCGTGCTGTGCACGCGCACGCCCTGTTCCAGCGCCGTGGTGACGATGCGGCGCACGCGGTCGTAGAGCATGGGCCCCGCGCCCGTGAGCACGAGCAGGGCCGCGCCCAGGACGGCACCGGCCACCAGGTCCTGGCTCTTGGTGGTCTGGCCCTTCTTGCGGGCGTCCTTGAGTTTCTTGGCTGTGGGCTCTTCGGTTTTTTCCGACAT
Protein sequence:
MSEKTEEPTAKKLKDARKKGQTTKSQDLVAGAVLGAALLVLTGAGPMLYDRVRRIVTTALEQGVRVHSTQELLALLSSMALDGMAVAFGMVIVSVLVAVLALLPQVGFMITFEPLTPKFDSLNPAEGLKKMFNARSLVEFAKSVLKAVVFGAVLWHIVTGLVPLLVGSVYLTPEASGQIAWSALLKLFSFAFLVFLVIGPLDFGLQHWLFMRDQRMSKDDVKRENKDSEGDPHLKGHLKSLREEMATSPPQERVPGATVVVTNPTHYAVALRYEAGATPLPIVVAKGMDEQAAVIRGLAALHHIPLIANPPLARALHKLPLDQPIPEELFEAVSVVLRWVAELDRLGGGSPR
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Main properties of effector
| Molecular weight | Sequence length | Theoretical pI | GRAVY | Instability index |
|---|---|---|---|---|
| 38133.9 | 352 | 8.96 | 0.262 | 41.09 |
Plant infestation information
| Experimental plant: | |
| Susceptible plant: | Disease name: |
| Host classification: | NCBI Species: |
Pathogen-plant protein interaction
| Uniprot ID | Protein name | Gene name | Species | Protein sequence |
|---|
No Record found.
External Links
Interpro: IPR006307,IPR006135,IPR029025
Pfam: PF01312
SMART:
KEGG: aav:Aave_0453
PRINTS: PR00950