Effector profile
PlantPEAD ID: PlantPEAD41256 | Uniprot ID: Q7D181 | Source: Orthologous |
Localization: Cytoplasmic(Pre) | Pathogen taxonomy ID: 1176649 | Pathogen type: Bacteria |
Species: Agrobacterium fabrum | Strain: (strain C58 / ATCC 33970 | Other name: Agrobacterium tumefaciens |
Gene name: FlhB | NCBI Gene ID: AE007869 | |
Entry name: Q7D181_AGRFC | Protein name: Flagellar biosynthetic protein FlhB | |
DOI: |
Gene/Protein information
Gene sequence:
TTGGCAGACGATCAGGACAAGGACAGTAAAACAGAAGACCCAACGGAGAAAAAACTCCGTGATGCGGCGGAAAAGGGCAATCTGCCATTTTCTCGCGAAGTGCCGATCTTTGCGTCGTCGCTCGCCTTTTACTGCTATCTGGTTTTCTTCCTGCCCGAGGGTGCCGGCCGTCTCGGGGTCACCTTGAAGGACCTGTTCGGCCAGCCCGAACAGTGGAACCTCAGCACCCGGCCGGATGCCCTGGCGCTGCTCTATTTTCTCGGCACATCCGTCGCTTACCTACTCATGCCGGCCATGATCATGTTCATCGTCTTCGGCCTTGCCTCGTCATTTCTTCAGAACCTGCCGTCGCCTGTGCTTGAACGGGTGCGTCCGCAATGGTCACGCATTTCGCCGGCAAAGGGTTTCACGCGCATCTACAGCAAGCAGGGTTTCGTGGAGTTCGCCAAATCGGTGTTCAAGATTATGATCGTTTCGATCATCATGTTCTTTGCGCTTCGCGGTGATTTCTACAGCCTCATCGATCTGATGTTTTCCGATCCGCAGGTGATTTTCGTGCGCGTGGTCGAGATCGTCAAAAAAATGATGGTCGTCATCTTGCTCTCGACCGCGCTGCTCGCCGCCGTGGACGTCTTATGGACACGACATCACTGGTTCAGCCAGCTGAAAATGACGAAGCATGAGGTGAAGGAAGAATATAAGCAGTCGCAGGGTGACCCGGTGGTCAAATCCCGCCAGCGCTCGATCGCCCGCGACCGTGCCCGCCGCCGCATGATCAACAACGTGCCGCGTGCGACGCTCGTCATCGCCAACCCGACACACTTTGCGGTAGCGCTGCGTTACGTGCGCGAAGAGGGTGACGCCCCTGTCGTCGTCGCCAAGGGCCAGGACCTTATCGCATTGAAAATCCGCCAGATTGCGGAAGAAAACAACATCCCCGTTTTTGAAGACCCTCCGCTTGCACGCTCCATGTTTGCGCAAGTCTCGGTAGATAGTGTGATTCCACCAGTCTTTTACAAGGCTGTGGCGGAGCTCGTTCATCGGGTTTACGCCCGGACGTCATCGAAAATACGGGTTCAATAA
Protein sequence:
MADDQDKDSKTEDPTEKKLRDAAEKGNLPFSREVPIFASSLAFYCYLVFFLPEGAGRLGVTLKDLFGQPEQWNLSTRPDALALLYFLGTSVAYLLMPAMIMFIVFGLASSFLQNLPSPVLERVRPQWSRISPAKGFTRIYSKQGFVEFAKSVFKIMIVSIIMFFALRGDFYSLIDLMFSDPQVIFVRVVEIVKKMMVVILLSTALLAAVDVLWTRHHWFSQLKMTKHEVKEEYKQSQGDPVVKSRQRSIARDRARRRMINNVPRATLVIANPTHFAVALRYVREEGDAPVVVAKGQDLIALKIRQIAEENNIPVFEDPPLARSMFAQVSVDSVIPPVFYKAVAELVHRVYARTSSKIRVQ
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Main properties of effector
Molecular weight | Sequence length | Theoretical pI | GRAVY | Instability index |
---|---|---|---|---|
40909.9 | 360 | 9.62 | 0.089 | 50.21 |
Plant infestation information
Experimental plant: | |
Susceptible plant: | Disease name: |
Host classification: | NCBI Species: |
Pathogen-plant protein interaction
Uniprot ID | Protein name | Gene name | Species | Protein sequence |
---|
No Record found.
External Links
Interpro: IPR006136,IPR006135,IPR029025
Pfam: PF01312
SMART:
KEGG: atu:Atu0564
PRINTS: PR00950