Effector profile
| PlantPEAD ID: PlantPEAD41262 | Uniprot ID: Q9F1J7 | Source: Orthologous |
| Localization: Cytoplasmic(Pre) | Pathogen taxonomy ID: 80867 | Pathogen type: Bacteria |
| Species: Paracidovorax avenae | Strain: | Other name: |
| Gene name: | NCBI Gene ID: AB053454 | |
| Entry name: Q9F1J7_9BURK | Protein name: Putative HrpN | |
| DOI: | ||
Gene/Protein information
Gene sequence:
GAATTCGCCAAGTCCGTCCTCAAGGCCGTCGTCTTCGGCGCCGTGCTGTGGCACATCGTGACCGGGCTGGTGCCCCTGCTCGTGGCCTCGGTCTATCTCACGCCCGAGGCCAGCGGAAAGATCGCCTGGAGCGCGCTGCTGAAACTCTTTTCGTTCGCATTCCTCGTCTTCCTGGTCATCGGCCCCCTCGACTTCGGCCTGCAGCACTGGCTCTTCATCCGGGACCAGCGCATGAGCAAGGACGACGTGAAGCGCGAGAACAAGGACAGCGAAGGCGACCCGCACCTCAAGGGCCACCTCAAGTCGCTGCGCGAGGAAATGGCGACATCACCGCCGCAGGAACGGGTGCCGGGCGCCACGGTGGTCGTCACCAACCCCACCCATTACGCCGTGGCGCTGCGCTACGAAGCCGGCGCGACCCCGCTGCCCATCGTCGTGGCCAAGGGCATGGACGAACAGGCCGCCGTCATCCGCGGACTGGCCGCGCTGCACCACATCCCGCTCATCGCCAATCCGCCGCTGGCGCGGGCCCTGCACAAGCTGCCGCTGGACCAGCCCATTCCCGAGGAACTGTTCGAGGCCGTCTCCGTCGTGCTGCGCTGGGTGGCGGAACTCGACCGGCTCGGCGGCGGCAGCCCGCGCTGA
Protein sequence:
EFAKSVLKAVVFGAVLWHIVTGLVPLLVASVYLTPEASGKIAWSALLKLFSFAFLVFLVIGPLDFGLQHWLFIRDQRMSKDDVKRENKDSEGDPHLKGHLKSLREEMATSPPQERVPGATVVVTNPTHYAVALRYEAGATPLPIVVAKGMDEQAAVIRGLAALHHIPLIANPPLARALHKLPLDQPIPEELFEAVSVVLRWVAELDRLGGGSPR
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Main properties of effector
| Molecular weight | Sequence length | Theoretical pI | GRAVY | Instability index |
|---|---|---|---|---|
| 23407.4 | 214 | 7.36 | 0.225 | 42.45 |
Plant infestation information
| Experimental plant: | |
| Susceptible plant: | Disease name: |
| Host classification: | NCBI Species: |
Pathogen-plant protein interaction
| Uniprot ID | Protein name | Gene name | Species | Protein sequence |
|---|
No Record found.
External Links
Interpro: IPR006135,IPR029025
Pfam: PF01312
SMART:
KEGG:
PRINTS: PR00950