Effector profile
| PlantPEAD ID: PlantPEAD41278 | Uniprot ID: A0A2I1GVY5 | Source: Orthologous |
| Localization: Apoplastic(Pre) | Pathogen taxonomy ID: 588596 | Pathogen type: Fungi |
| Species: Rhizophagus irregularis | Strain: | Other name: Arbuscular mycorrhizal fungus, Glomus intraradices |
| Gene name: | NCBI Gene ID: LLXI01000920 | |
| Entry name: A0A2I1GVY5_9GLOM | Protein name: COPII coat assembly protein SEC16 | |
| DOI: | ||
Gene/Protein information
Gene sequence:
ATGATTCCTAAATCACATTATAGTCCTAATACAAATGCACCTTATGTTTTTTCTAATGTTACAACACCATACACCTCTTTATCAGATCATAGTACTCCGCTTGATAGTTTAGTAAAATGGCGAGAAACGATAGCAATGATTTTAGCAAATCGAGCACCAGGAGATAATCAAGCAATTTCTGCTCTCGGAGATATGCTTAAAGAGTATGGATGGATTCATGCTTCACATATCTGTTATATATTATCACCTAATGCATCACTTATATCTGGCTTTGATGCACCCAATGTTCGATTTACACTACTGGGCAATGATTATACACAAAATCTTCTCATAAATAATTTTTATAATTGGCAATCATTACGTATGACTGAGATTTATGAATTTGGACTTTCACTGAATAATAGCGATGGTGGACTACCTCATTTGCAAGCATATAAGCTGCTTTATGCATGGTGGTTGGCTGATTGTGGTTATTTAAACGAAGCAAGAAGATATTGCGAATCGATTGCAAATATTGTAAAGATTTACACTAAAGGTTCACCATATTTTCATGGTTGCTTCTTACAAAAATTGAAAGATTTAACGCAACGACTACTTGAACATGGAGGAGGAGGAGGGTAA
Protein sequence:
MIPKSHYSPNTNAPYVFSNVTTPYTSLSDHSTPLDSLVKWRETIAMILANRAPGDNQAISALGDMLKEYGWIHASHICYILSPNASLISGFDAPNVRFTLLGNDYTQNLLINNFYNWQSLRMTEIYEFGLSLNNSDGGLPHLQAYKLLYAWWLADCGYLNEARRYCESIANIVKIYTKGSPYFHGCFLQKLKDLTQRLLEHGGGGG
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Main properties of effector
| Molecular weight | Sequence length | Theoretical pI | GRAVY | Instability index |
|---|---|---|---|---|
| 23194.3 | 206 | 6.64 | -0.213 | 36.92 |
Plant infestation information
| Experimental plant: | |
| Susceptible plant: | Disease name: |
| Host classification: | NCBI Species: |
Pathogen-plant protein interaction
| Uniprot ID | Protein name | Gene name | Species | Protein sequence |
|---|
No Record found.
External Links
Interpro: IPR024298,IPR024880
Pfam: PF12931
SMART:
KEGG:
PRINTS: