Effector profile
PlantPEAD ID: PlantPEAD41282 | Uniprot ID: A0A2P4PXX2 | Source: Orthologous |
Localization: Apoplastic(Pre) | Pathogen taxonomy ID: 588596 | Pathogen type: Fungi |
Species: Rhizophagus irregularis | Strain: strain DAOM 181602 / DAOM 197198 / MUCL 43194 | Other name: Arbuscular mycorrhizal fungus, Glomus intraradices |
Gene name: | NCBI Gene ID: AUPC02000123 | |
Entry name: A0A2P4PXX2_RHIID | Protein name: Protein transport protein sec16 | |
DOI: |
Gene/Protein information
Gene sequence:
TCTAATTATCAGTATTATCAAGGATATCAACCTATTACCCCTTCTCCACAAACATCTCCCCCTCCAATATCACCATCTCCAAAAGGATCAAGTTTAATATCCTGTCCAGATCCTCAATGTGGGGGTGGAAATAAAGTTACTGCTAAATTTTGTTCAGATTGTGGAAAGCCGATTAATGTTATTATGAACTCGATAACTTCTGCAGTGAATATTTCTGAAGTGACCAATCTTTATAATAATTTGAATGCTTACTCCAAACAACCTCTACCCTATAGCCAACAATATTATAGTTCTGATGATATAAATGATCCTCTAGGAAGATCTAAGGGATGTCGGCCTATTGTTGCGTTTGGATTTGGAGGAAAGATATATACTATGTTCCCAAGAACAGTTCAACGCTTTACTAACACAGATTATAGTACGCCTATTACTAAATCTGCACCTGGTGCCTTTACCATTCGTGTTCTCAAGGATATCATTCCTGTATCAGACATTGCCGATTTTCCGGGTCCTTTGCTTATGGACAATAATAGAGGCGGTGTAAAGGCTAAAAAGAAAAATGTATTAAAGTTCTTAAATGATCAGATTCAAGTATCAGAAAATAATATAAGTTCTTTCAATGGCGGAGAAGTCGAAAAGGAAAAATTGGAATCTATTTTAATTGTCTGGAATCTGTTTAAAATAATGTTTGAGAATGAAGGCGCGTTAATCGGAAGTCCAAAAGTTGAAGAACTAGTGCGTAAAATTTTAGTTCCATCCGCGTCTAAAAGTAACGATGAAGCAAACTTTACAGTTCCTGCAGACACAGGCTTTGATACCCAAAAAGGCTTGCCACAAACGCCAGAAACTTCTTCACTTACATATTCTGTTTCAGTAAAGTCTGTTGACAAGTTGCAAGAGATGCTATTAAAAGGTGATCGTATTGCAGCCATTCACCATGCTATGAATGAAAATTTATGGGCACATGCACTAATAATTGCCAGCTGTGTCAATAAAGAATTATGGAAAGAGGTTGTTACTGGGTTTATTAAACATGAAATGGGCACCCATATTGGCGAAACTTCTGAATCCAACGGAAGAGAAAGTTTAAGAGTACTATATTCTTTGTTTGCTGGCCAAGGACAAAACGCAGGTACGCCAAATTATATAATAATTTTCAATCCTAATACAAATGCACCTTATGTTGTTTCTAATGTTACAACACCATACACCTCTTTATCAGATCATAATACTCCGCTTGATAGTTTAGTAAAATGGCGAGAAACGATAGCAATGATTTTAGCAAATCGAGCACCAGGAGATAATCAAGCAATTTCTGCTCTCGGAGATATGCTTAAAGAGTATGGATGGATTCATGCTTCACATATCTGTTATATATTATCACCTAATGCATCACTTATATCTGGCTTTGATGCACCCAATGTTCGATTTACACTACTGGGCAATGATTATACACAAAATCTTCTCATAAATAATTTTTATAATTGGCAATCATTACGTATGACTGAGATTTATGAATTTGGACTTTCACTGAATAATAGCGATGGTGGACTACCTCATTTGCAAGCATATAAGCTGCTTTATGCATGG
Protein sequence:
SNYQYYQGYQPITPSPQTSPPPISPSPKGSSLISCPDPQCGGGNKVTAKFCSDCGKPINVIMNSITSAVNISEVTNLYNNLNAYSKQPLPYSQQYYSSDDINDPLGRSKGCRPIVAFGFGGKIYTMFPRTVQRFTNTDYSTPITKSAPGAFTIRVLKDIIPVSDIADFPGPLLMDNNRGGVKAKKKNVLKFLNDQIQVSENNISSFNGGEVEKEKLESILIVWNLFKIMFENEGALIGSPKVEELVRKILVPSASKSNDEANFTVPADTGFDTQKGLPQTPETSSLTYSVSVKSVDKLQEMLLKGDRIAAIHHAMNENLWAHALIIASCVNKELWKEVVTGFIKHEMGTHIGETSESNGRESLRVLYSLFAGQGQNAGTPNYIIIFNPNTNAPYVVSNVTTPYTSLSDHNTPLDSLVKWRETIAMILANRAPGDNQAISALGDMLKEYGWIHASHICYILSPNASLISGFDAPNVRFTLLGNDYTQNLLINNFYNWQSLRMTEIYEFGLSLNNSDGGLPHLQAYKLLYAW
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Main properties of effector
Molecular weight | Sequence length | Theoretical pI | GRAVY | Instability index |
---|---|---|---|---|
58455.3 | 530 | 6.33 | -0.266 | 33.85 |
Plant infestation information
Experimental plant: | |
Susceptible plant: | Disease name: |
Host classification: | NCBI Species: |
Pathogen-plant protein interaction
Uniprot ID | Protein name | Gene name | Species | Protein sequence |
---|
No Record found.
External Links
Interpro: IPR024298,IPR024880,IPR024340
Pfam: PF12932,PF12931
SMART:
KEGG:
PRINTS: