Effector profile
| PlantPEAD ID: PlantPEAD41283 | Uniprot ID: A0A2P4PXX5 | Source: Orthologous |
| Localization: Cytoplasmic(Pre) | Pathogen taxonomy ID: 588596 | Pathogen type: Fungi |
| Species: Rhizophagus irregularis | Strain: strain DAOM 181602 / DAOM 197198 / MUCL 43194 | Other name: Arbuscular mycorrhizal fungus, Glomus intraradices |
| Gene name: | NCBI Gene ID: AUPC02000123 | |
| Entry name: A0A2P4PXX5_RHIID | Protein name: COPII coat assembly protein SEC16 | |
| DOI: | ||
Gene/Protein information
Gene sequence:
ATGCCAAAAGCAACTCTCGATTCTCTGTGGGGTTCATTAGAAGGAAAGTTCAATAAGTTTGTTGCTGGAGATGTAATAGATGAAAATGTTAGGAAATCTTCATCCTCGAGTACCTCCGAAACTATTGGACCATTTTCACATTTTAGTTCCATCACCCATCCCACTTCTGAAGTGCCATCTCGTAGTGTATCTGCTTCAGACTTTCGTCCTATCCCCAATCCTACTGTAGATATTCGTCGTGCAACTACCCCGAGCGCAGTGGTTCAAAAACACTTAAATGGAAATCAGCGAAGATCGTCAACTCCTGGTGTTGGACTAGTTAACGGTGGTTATAATGATAATTTTAGCCCTACTACATCTGATGGTCAAAATACGATTTCTTCCGTCCCTGAAAGAGAATCTCTTGAAACGTCTCCAACGGATGACAAAAACGGTTATTATGGACATTTTAAAAGGCAGGACCAACAATATTCTGGTTCTTACGGGTATTCCAGTTATAAACATTTTGATAATAACCAACAATCAGTTACGGATAATGGATATGCATACGGTGCTAGTTCTAATGAACAACAGTCAGGCTATAATGATACTCCATTATCGGATTATTCTGGTGTTGAAACAAATAAACAAAATCAACATCAACAACCTATTTATTCATATTATCAACCATCGGAAGCGTCTTACAAAAATGATTCTGCATGGTGGAATGACCCAAATTCTGATTCTACCAATATAATTGAGGATCAAAAAGCAGACCAAACCCAAACTGATGATATTGGTGAGGGTGAATTCATATCTCTCATGGATAATAATTTTACATTTGTTCCAGCACCAGCACCAGCACCAGCACCATCAACGACAGGCACTTCAAATCAAAATAATACTTTGGATGAGGATTATGATGATTTGGGTTTAGGAAATAATTCGTTTGGATCCAAAAAGAATAATGATCAAACTACAGATTCTGTGACTGACATAAGCAATAATAGCCATGAAACTAAACATGATATTTCTCAAACAGAACAAAAAAAGGAAGAAAAGCAGGATGAACAACAGGAAAAGAAAGGATGGTTTGGAAGATGGTTTGGAAAGAAAGAAGGTGGCAAAACTGCTAATTTAGGAGAAGAAAGTTCATTTTACTATGATCCAGTTCAAAAAAGATGGATTAATAAGAAGGCTGGTAATGAGCCTAATAATACATTAATGCCACCACCACCTCCTCCGCAACGTTCAAAAACAACATCACCTCAGTCCTCATATTCAGCGATGAGTTCAAATCCTAACAGACAATCATTACCTCCTATGGATAACAAAAATCTTGCAGGCCCGCCAATTAGTGCTACACCACCACCACCAAACAAAGGTGGCCGTGCATCAAGTGCAAGTATGAGACGGGGTGTCAGAAGATATGTGGATATAATGAATCAACCACCGCCTAATTAA
Protein sequence:
MPKATLDSLWGSLEGKFNKFVAGDVIDENVRKSSSSSTSETIGPFSHFSSITHPTSEVPSRSVSASDFRPIPNPTVDIRRATTPSAVVQKHLNGNQRRSSTPGVGLVNGGYNDNFSPTTSDGQNTISSVPERESLETSPTDDKNGYYGHFKRQDQQYSGSYGYSSYKHFDNNQQSVTDNGYAYGASSNEQQSGYNDTPLSDYSGVETNKQNQHQQPIYSYYQPSEASYKNDSAWWNDPNSDSTNIIEDQKADQTQTDDIGEGEFISLMDNNFTFVPAPAPAPAPSTTGTSNQNNTLDEDYDDLGLGNNSFGSKKNNDQTTDSVTDISNNSHETKHDISQTEQKKEEKQDEQQEKKGWFGRWFGKKEGGKTANLGEESSFYYDPVQKRWINKKAGNEPNNTLMPPPPPPQRSKTTSPQSSYSAMSSNPNRQSLPPMDNKNLAGPPISATPPPPNKGGRASSASMRRGVRRYVDIMNQPPPN
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Main properties of effector
| Molecular weight | Sequence length | Theoretical pI | GRAVY | Instability index |
|---|---|---|---|---|
| 52870.9 | 480 | 5.25 | -1.184 | 61.51 |
Plant infestation information
| Experimental plant: | |
| Susceptible plant: | Disease name: |
| Host classification: | NCBI Species: |
Pathogen-plant protein interaction
| Uniprot ID | Protein name | Gene name | Species | Protein sequence |
|---|
No Record found.
External Links
Interpro:
Pfam:
SMART:
KEGG:
PRINTS: