Effector profile
| PlantPEAD ID: PlantPEAD41409 | Uniprot ID: A0A507CXS0 | Source: Orthologous |
| Localization: Cytoplasmic(Pre) | Pathogen taxonomy ID: 286115 | Pathogen type: Fungi |
| Species: Synchytrium endobioticum | Strain: | Other name: |
| Gene name: | NCBI Gene ID: QEAM01000203 | |
| Entry name: A0A507CXS0_9FUNG | Protein name: DNA topoisomerase (ATP-hydrolyzing) | |
| DOI: | ||
Gene/Protein information
Gene sequence:
ATGAGAAGGAAAGAGAGATCCTGTAAATCCAATGACAAAGAAGGTGACCATAGAGGTATAACACAGTCTCCAACTTATGCCTCCCTATCAAGCCAGAACCGCACGCATAACAATGTAATTGATCTCACCGATGATGTCGCCATGGATGAAGAAAAAATGGACGAGCCTGACTCGTTAAAATCGACTGCAAATTCAACTGTACGTGATAGATTACCGTCTGTAGATGAGGATGTAACAGCACGGGATGTTGGTGCCGCTGTATACAATGCTATCATCAAAACGGGATGGAAATCGATCATTCGAGCATCACCTCACCAACTGCCTCCCTATAGCTTCTTTGCATCAGGCTTCTTAGTTACACTGATATTCAATCCCGAGAAAGCGGACAGGAGTAACGAGGAGGTGTTGTTATCCCTGCCACTACTACTGGATTTATCTTTCAATGCTGCACGTACATCGTTGCCAAGCAGCCCAATGCCTATATCTGCAAACATATCAGCATCATCAATCAAAGAGCCCATACCCTCTGTATCTATCTTCCCTGATGGTGGCACCGTATTGGTCATCGACGGTGCTCCCACTTCTGCCAAGTCAGAGACTAGCATGAAGCGCCATCGGGAATGGGGCAAAGTGGTTGATGAGTTGGACAAGGTAGCTGCTTCCATGAAGCAGGCGGCTGACGATGGCAAAAAGAGAATGCCAAAGTACTTTTATGAAAAGTTAGATCGGTTGACACGTCGCTCGTTCCTCGTGAATGACGACGTCAAGACCAGTCTCGCCGCTGCTCTGGAAGCAGAGTTCAAGGTCGAGAAGGCATCCGGTGAAACTGATGTATACATCGGCCGGGTAGCTACCGTCCTGGACATTGTCGTCTCTGGGGATTCAGACGTCTTTTGCTACAGGAATGTCAAGACAATGGTCAGGCCAACACGCCATAGAGGGCAATACGTTCTCAACGTACTGCATAAGAGTCTCGCATTGAGGAAGATGAGACTCAATTCTGATGACCTTGTCGTCCTCGCTGTTGTATCGGGGAATGATTACACAAATGGCTTGGTTCTTCCCATGCTATGGATCGACATCACTAGCAAGCCGCCACCACCCGATCGTAAGGTGGAAGATGCCATCAACCTTCCAAACATCTTCCAAAATAAATTCTTGCAATCGACTCACCGAGATGCCTGGATCATAGCCTTAGATCCCGGGGCCACCTGCATTGTAGGTGCAGTGGCTTATGACCCCAACCACCCTGATCAACGACGTAATCTAGCCGTCACTACGAAATGCCTTGCTGAACCCGAACGGCGTTACAGAAATTGGCTGGAGGCCAACAAGCCGGAGGCCATTTGCACAGCCGAACGGGAGTGCACCAAGTCCGACCAGGTGACTTGGGCCGTCTTCCTCGAACGCTTTGTCATATCATATGACATAGCGCGTACTTATTATAGCTCCACGAAGTACAAGAGGAAGCGGTGGGATGCCGACAAAGCAAAACGTGGCGAGCTAGATAGGGTGTTGGAAAGTATTGTCAAAATGGTGGGCGAGTCCATGGGCCACAAGTTATCGGGTGATAAGAAGGTTATAGTGGCCATGGGGATGGGTGACTTTAGTTCGGCCAAGTCACGCCATGTCATGTTTACCAGAATATCTGGCATACCAAAGCTCGACGATGCCAACAATGCAGGTACCAAAAATGGTAGAAACTGTACTCTGATCCTGACTGAAGGAGATTCTGCTAAAGCTTTGGCTGTGTCTGGACTGTCAGTCATAGGGCGTGATAGTTATGGAGTGTTTCCCCTGCGAGGCAAACTGCTGAATGTACGAGATGCCACGCATAAGCAATTGATGGATAATGCGGAAATCAGCAGTTTGAAAAAGATTCTTGGCCTGCAACACAATAAAGAATACAAGACTGTGGATGGGTTGCGATATGGTCATCTCATGCTCATGACCGATCAGGATCATGATGGATCACATATCAAAGGGCTTTTGATCAACTTTTTGGATCACCATTGGCCAAGTCTCCTAAAGATTCCAGGTTTTCTGTTAGAGTTCATTACTCCCATTGTCAAGGTCACCAAAGGCCCTCGTGAAATCGCCTTTTACACCATTCCTCAATACGAACAGTGGAAAGAGACCAACAACAAGGGGAAGGGGTGGACTATTAAGTACTATAAGGGGTTAGGTACTAGTACGGCTGCCGACGCCAAGAAGTACTTTTTGAAGATGGAATCTCACAAGAAGCCGTTCGACGCTGCTACAGATGTTGATCATAATGCCATTGATTTGGCCTTCAACAAAAAAAAGGCGGATGATAGAAAGGAATGGATAGGTCAATTCACGCCTGGCACATTTCTTGACAATCGCGTTAAATCGGTAAAGATAGAAGATTTCGTAAATAAAGAGTTGATTATTTTTATATCCACCTACGCCACACGTATGGCACCGTGGTTTGATGCCGACTCTGTCCCATCCTTGGATCATGTCCGGGACAAGAACGACTTGCATACGCATCTCCCCTCCGGATCAGCAAGGATCTCCCATGTCATAACCAGGCTATTTCCATACCGGCATCGCACCATGAACGAACTACTCGATAACCTCCACCAGCCAAAGCGGCCAAGGAATCCATCCATGGGCATGACCGCCGCTGATGAAGCTGCTGCGATCTCTCGTGTAGCCACCAACCACAACAGAGCCGCATCAAACACTGCTACGGACACAACCCTGGTAGCATCCCCACCACCACCACCACCTACATCCCAGGCCACCACCGAACTTGGAAAGCCGCTGATTGTGACCGGCCCACCGACTCGGGAGCACTGGCTTCCGGACAAGGAAGCCCAATATTGTCGTTGGTGTGGGATCAAGTTCACCATGTTTCATCGAAAACATCATTGTAGAAGATGTGGTGCTGTGGGATGCAGCGCTTGCTGCTCTCAATACTGTCGATTGGATCAAACCGCCTCATTTCATCCCGCTGGTTTGCAGTCACGAGTGTGTCAAAATTGTTACAGTGATTTCACATCCCGGGTAGTCCCTGTCAAGCCACTAGTCATCGAATCCGAGTCAACGAGTGATACCACGACTCAAGTACGGAACGCACCAGGGGCAGATTCCGCGCAGGCAGTTCCGATACTAGTGCAGGATGATCAAGCCAATAATAATCCACCTCCACAAGCGACTGTACCAAGCGATTGGACATGGTCAACGTTTTGA
Protein sequence:
MRRKERSCKSNDKEGDHRGITQSPTYASLSSQNRTHNNVIDLTDDVAMDEEKMDEPDSLKSTANSTVRDRLPSVDEDVTARDVGAAVYNAIIKTGWKSIIRASPHQLPPYSFFASGFLVTLIFNPEKADRSNEEVLLSLPLLLDLSFNAARTSLPSSPMPISANISASSIKEPIPSVSIFPDGGTVLVIDGAPTSAKSETSMKRHREWGKVVDELDKVAASMKQAADDGKKRMPKYFYEKLDRLTRRSFLVNDDVKTSLAAALEAEFKVEKASGETDVYIGRVATVLDIVVSGDSDVFCYRNVKTMVRPTRHRGQYVLNVLHKSLALRKMRLNSDDLVVLAVVSGNDYTNGLVLPMLWIDITSKPPPPDRKVEDAINLPNIFQNKFLQSTHRDAWIIALDPGATCIVGAVAYDPNHPDQRRNLAVTTKCLAEPERRYRNWLEANKPEAICTAERECTKSDQVTWAVFLERFVISYDIARTYYSSTKYKRKRWDADKAKRGELDRVLESIVKMVGESMGHKLSGDKKVIVAMGMGDFSSAKSRHVMFTRISGIPKLDDANNAGTKNGRNCTLILTEGDSAKALAVSGLSVIGRDSYGVFPLRGKLLNVRDATHKQLMDNAEISSLKKILGLQHNKEYKTVDGLRYGHLMLMTDQDHDGSHIKGLLINFLDHHWPSLLKIPGFLLEFITPIVKVTKGPREIAFYTIPQYEQWKETNNKGKGWTIKYYKGLGTSTAADAKKYFLKMESHKKPFDAATDVDHNAIDLAFNKKKADDRKEWIGQFTPGTFLDNRVKSVKIEDFVNKELIIFISTYATRMAPWFDADSVPSLDHVRDKNDLHTHLPSGSARISHVITRLFPYRHRTMNELLDNLHQPKRPRNPSMGMTAADEAAAISRVATNHNRAASNTATDTTLVASPPPPPPTSQATTELGKPLIVTGPPTREHWLPDKEAQYCRWCGIKFTMFHRKHHCRRCGAVGCSACCSQYCRLDQTASFHPAGLQSRVCQNCYSDFTSRVVPVKPLVIESESTSDTTTQVRNAPGADSAQAVPILVQDDQANNNPPPQATVPSDWTWSTF
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Main properties of effector
| Molecular weight | Sequence length | Theoretical pI | GRAVY | Instability index |
|---|---|---|---|---|
| 119662 | 1072 | 8.93 | -0.456 | 38.14 |
Plant infestation information
| Experimental plant: | |
| Susceptible plant: | Disease name: |
| Host classification: | NCBI Species: |
Pathogen-plant protein interaction
| Uniprot ID | Protein name | Gene name | Species | Protein sequence |
|---|
No Record found.
External Links
Interpro: IPR029060,IPR001241,IPR013760,IPR013759,IPR001154,IPR018522,IPR031660,IPR006171,IPR034157,IPR000306,IPR017455,IPR011011,IPR013083
Pfam: PF01363,PF01751,PF16898
SMART: SM00064,SM00433
KEGG:
PRINTS: PR01158,PR00418